RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 FAM167AQ96KS9 214 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 FEM1BQ9UK73 627 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 LTN1O94822 1766 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 EEF2KO00418 725 aaKnown RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ACSL4O60488 711 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 DCKP27707 260 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 KCTD19Q17RG1 926 aaPredicted RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ZNF557Q8N988 423 aaPredicted RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 STARD8Q92502 1023 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ZNF354BQ96LW1 612 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 PAK6Q9NQU5 681 aaPredicted RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 DEPDC5O75140 1603 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ENTPD5O75356 428 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ZBTB11O95625 1053 aaPredicted RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 DHDDSQ86SQ9 333 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 UBQLN2Q9UHD9 624 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 DRG1Q9Y295 367 aaKnown RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 NARSO43776 548 aaKnown RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 HMGCRP04035 888 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 RARBP10826 455 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ARHGAP36Q6ZRI8 547 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 GABBR1Q9UBS5 961 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 GALCP54803 685 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ADAM32Q8TC27 787 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 NFIAQ12857 509 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 SLC7A14Q8TBB6 771 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 FARSBQ9NSD9 589 aaKnown RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 INTS7Q9NVH2 962 aaKnown RBP11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 SPATA7Q9P0W8 599 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 ENTPD4Q9Y227 616 aa11.25□□□□□ -0.61
HDGFL3-201ENST00000299633 RBP3P10745 1247 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 GPR158Q5T848 1215 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ZNF549Q6P9A3 640 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 SGMS1Q86VZ5 419 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 TSEN15Q8WW01 171 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 SEMA4DQ92854 862 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 DPY30Q9C005 99 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ABCB9Q9NP78 766 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 A1CFQ9NQ94 594 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 OAS3Q9Y6K5 1087 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 NCOA3Q9Y6Q9 1424 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 PIGNO95427 931 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 IL1R1P14778 569 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ITGA2P17301 1181 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ALDH4A1P30038 563 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 TFDP3Q5H9I0 405 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 C2orf40Q9H1Z8 148 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 C19orf12Q9NSK7 152 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 PDX1P52945 283 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 HERVK_113P62684 666 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ALX1Q15699 326 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 AARDQ4LEZ3 155 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 PTCHD4Q6ZW05 846 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ZNF677Q86XU0 584 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 SPATA2LQ8IUW3 424 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 PARP8Q8N3A8 854 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 AENQ8WTP8 325 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 SLC47A1Q96FL8 570 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 LOC100509620A0A075B734 347 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CCDC163A0A0D9SF12 145 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 LRIG2O94898 1065 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CYP4B1P13584 511 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 TXNL4AP83876 142 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CYP4F8P98187 520 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 PAGE2BQ5JRK9 111 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 FBXW8Q8N3Y1 598 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 TERB2Q8NHR7 220 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ATG4AQ8WYN0 398 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 TESCQ96BS2 214 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CCDC74BQ96LY2 380 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 TDRKHQ9Y2W6 561 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 PMPCBO75439 489 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 RLN2P04090 185 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 COMTP21964 271 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CLCN2P51788 898 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 AIMP2Q13155 320 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 DNAJC14Q6Y2X3 702 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ZSWIM2Q8NEG5 633 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 OR2L2Q8NH16 312 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 KCNN3Q9UGI6 736 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 DPPA5A6NC42 116 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 MYL3P08590 195 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 TCF7P36402 384 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 FOXO4P98177 505 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 NEDD4LQ96PU5 975 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CDADC1Q9BWV3 514 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 RRN3P2A6NIE6 340 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 DGAT1O75907 488 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CYP17A1P05093 508 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 CD79BP40259 229 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 NSUN6Q8TEA1 469 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 FRMD8P1Q9BZ68 369 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 SAE1Q9UBE0 346 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 ERI2A8K979 691 aaKnown RBP11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 RIPPLY1Q0D2K3 151 aa11.24□□□□□ -0.61
HDGFL3-201ENST00000299633 FAM92BQ6ZTR7 304 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms