RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FZD1Q9UP38 647 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ASLP04424 464 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ITGB5P18084 799 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 GTF2A2P52657 109 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 TRAP1Q12931 704 aaKnown RBP16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 FASTKD3Q14CZ7 662 aaKnown RBP16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 STXBP5Q5T5C0 1151 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 MACC1Q6ZN28 852 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 CDK20Q8IZL9 346 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 CACTIN-AS1Q8N1I8 211 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 TNPO3Q9Y5L0 923 aaKnown RBP16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 WNT10BO00744 389 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ALDH2P05091 517 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 PIRTP0C851 137 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 HPGDP15428 266 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 PEX2P28328 305 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 CRATP43155 626 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 DDI2Q5TDH0 399 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 DENND5AQ6IQ26 1287 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 C16orf59Q7L2K0 433 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 EPB41L4BQ9H329 900 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ARHGAP28Q9P2N2 729 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 WBP11Q9Y2W2 641 aaKnown RBP16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 PCP4L1A6NKN8 68 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 SEMA3DO95025 777 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 OR56A5P0C7T3 313 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ERCC2P18074 760 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 CLCN5P51795 746 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ITGA1P56199 1179 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 CAPSQ13938 189 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 FAM171A1Q5VUB5 890 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 GALNT18Q6P9A2 607 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 UNC93AQ86WB7 457 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ERI1Q8IV48 349 aaKnown RBP16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 LINC00032P0C843 101 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 NPR3P17342 541 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CYP4F2P78329 520 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CYP4F3Q08477 520 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 DACT2Q5SW24 774 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 SDE2Q6IQ49 451 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 NOL11Q9H8H0 719 aaKnown RBP16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 TBCCD1Q9NVR7 557 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 NKX1-2Q9UD57 310 aaPredicted RBP16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 FAM198AQ9UFP1 575 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 FBXO5Q9UKT4 447 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 PLLPQ9Y342 182 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 TIPRLO75663 272 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CST1P01037 141 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 IL6P05231 212 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CDT1Q9H211 546 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CXorf21Q9HAI6 301 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CRNNQ9UBG3 495 aaPredicted RBP16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 BCLAF3A2AJT9 711 aaKnown RBP16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CLDN25C9JDP6 229 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ADGRB2O60241 1585 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 GRK4P32298 578 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 SRP54P61011 504 aaKnown RBP16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ATAD3BQ5T9A4 648 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 TAMM41Q96BW9 452 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 UBIAD1Q9Y5Z9 338 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ABCA9Q8IUA7 1624 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 TK2O00142 265 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ZBTB14O43829 449 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ACADVLP49748 655 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 OAZ1P54368 228 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 KLF10Q13118 480 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 RFWD3Q6PCD5 774 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 SLCO6A1Q86UG4 719 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ANKRD49Q8WVL7 239 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 SLC44A1Q8WWI5 657 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 REXO5Q96IC2 774 aaKnown RBP16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 HSFY1Q96LI6 401 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF317Q96PQ6 595 aaPredicted RBP16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 PANX3Q96QZ0 392 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 TAS2R1Q9NYW7 299 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CPA4Q9UI42 421 aa16.56■□□□□ 0.24
SH3RF1-201ENST00000284637 CCDC182A6NF36 153 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 PDLIM1O00151 329 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 CNPP09543 421 aaKnown RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 MPSTP25325 297 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 AQP4P55087 323 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 RPL38P63173 70 aaKnown RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 IRF8Q02556 426 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 HSPA14Q0VDF9 509 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 STX4Q12846 297 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 ILF2Q12905 390 aaKnown RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 UGCGQ16739 394 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 FOXR2Q6PJQ5 311 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 KIAA0408Q6ZU52 694 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 MTSS1LQ765P7 747 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 NKAPQ8N5F7 415 aaKnown RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 COPS5Q92905 334 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 KLHL31Q9H511 634 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 RXRGP48443 463 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 AKR1D1P51857 326 aa16.55■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF135P52742 658 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms