RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 GABPB2Q8TAK5 448 aaPredicted RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 LMLNQ96KR4 655 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 NSMCE3Q96MG7 304 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 ZNF317Q96PQ6 595 aaPredicted RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 CCT8L2Q96SF2 557 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 PAIP2Q9BPZ3 127 aaKnown RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 RAI2Q9Y5P3 530 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 MYOFQ9NZM1 2061 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 TIMM44O43615 452 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 GLP2RO95838 553 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 MT-CO1P00395 513 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 AP1S1P61966 158 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 PDE1BQ01064 536 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 THOC5Q13769 683 aaKnown RBP18.28■□□□□ 0.52
VIM-201ENST00000224237 UGP2Q16851 508 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 HHATQ5VTY9 493 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 BRSK1Q8TDC3 778 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 BLOC1S5Q8TDH9 187 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 TIFAQ96CG3 184 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 FAM167BQ9BTA0 163 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.28■□□□□ 0.522e-8■■■■□ 26.1
VIM-201ENST00000224237 INTS6Q9UL03 887 aaKnown RBP18.28■□□□□ 0.52
VIM-201ENST00000224237 CHKBQ9Y259 395 aa18.28■□□□□ 0.52
VIM-201ENST00000224237 LINC01565O15544 149 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 LDB2O43679 373 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 SIN3BO75182 1162 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 ALDOAP04075 364 aaKnown RBP18.27■□□□□ 0.52
VIM-201ENST00000224237 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 RARS2Q5T160 578 aaKnown RBP18.27■□□□□ 0.52
VIM-201ENST00000224237 TDHQ8IZJ6 230 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 OR13J1Q8NGT2 312 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 CALML6Q8TD86 181 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 ISL2Q96A47 359 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 RMDN1Q96DB5 314 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 MRPL38Q96DV4 380 aaKnown RBP18.27■□□□□ 0.52
VIM-201ENST00000224237 SRPK1Q96SB4 655 aaKnown RBP18.27■□□□□ 0.52
VIM-201ENST00000224237 MCMBPQ9BTE3 642 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 ADGRE3Q9BY15 652 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 LINC00597Q9H2U6 94 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 PCMTD2Q9NV79 361 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 MARK1Q9P0L2 795 aa18.27■□□□□ 0.52
VIM-201ENST00000224237 TPP1O14773 563 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 TYRP14679 529 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 CCT5P48643 541 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 FSTL4Q6MZW2 842 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 ADGRG2Q8IZP9 1017 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 TNS4Q8IZW8 715 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 NDUFAF2Q8N183 169 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 ZNF473Q8WTR7 871 aaKnown RBP18.26■□□□□ 0.51
VIM-201ENST00000224237 PTPRN2Q92932 1015 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 FAM107BQ9H098 131 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 RIMKLBQ9ULI2 386 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 PCDHGC4Q9Y5F7 938 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 WNT6Q9Y6F9 365 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 ANKRD36A6QL64 1941 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 K7ERQ8 282 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 PRLP01236 227 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 HADHAP40939 763 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 MAPK8P45983 427 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 SERPINB8P50452 374 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 LY6G5CQ5SRR4 150 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 CPLX4Q7Z7G2 160 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 SRLQ86TD4 932 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 ST13P5Q8NFI4 369 aaPredicted RBP18.26■□□□□ 0.51
VIM-201ENST00000224237 ATP2A3Q93084 1043 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 RHOJQ9H4E5 214 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 SLC17A7Q9P2U7 560 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 GGA2Q9UJY4 613 aa18.26■□□□□ 0.51
VIM-201ENST00000224237 SLC7A4O43246 635 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 SMAD6O43541 496 aaKnown RBP18.25■□□□□ 0.51
VIM-201ENST00000224237 CRTAMO95727 393 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 PRKCGP05129 697 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 VIMP08670 466 aaKnown RBP18.25■□□□□ 0.51
VIM-201ENST00000224237 CRHR1P34998 444 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 ETV4P43268 484 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 CSNK1DP48730 415 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 PRAMEP78395 509 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 ACVR1Q04771 509 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 HYAL1Q12794 435 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 TRAF2Q12933 501 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 DMC1Q14565 340 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 FUT11Q495W5 492 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 ATXN7L2Q5T6C5 722 aaPredicted RBP18.25■□□□□ 0.51
VIM-201ENST00000224237 KIAA0408Q6ZU52 694 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 DCLK2Q8N568 766 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 LPCAT1Q8NF37 534 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 SPOCK2Q92563 424 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 ATXN7L3BQ96GX2 97 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 VPS39Q96JC1 886 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 LRRC3BQ96PB8 259 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 SLC13A1Q9BZW2 595 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 TM6SF2Q9BZW4 377 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 NSRP1Q9H0G5 558 aaKnown RBP18.25■□□□□ 0.51
VIM-201ENST00000224237 HS3ST2Q9Y278 367 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 ARL5AQ9Y689 179 aa18.25■□□□□ 0.51
VIM-201ENST00000224237 TCP11X1B4DZS4 312 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 ANKRD66B4E2M5 251 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 IGSF6O95976 241 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 PDHA1P08559 390 aa18.24■□□□□ 0.51
VIM-201ENST00000224237 PABPC1P11940 636 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms