RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 C11orf84Q9BUA3 381 aaPredicted RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 HIPK3Q9H422 1215 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 CALML5Q9NZT1 146 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 GHRLQ9UBU3 117 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 ZNF180Q9UJW8 692 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 ERGIC3Q9Y282 383 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 ACTL7BQ9Y614 415 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 PP2D1A8MPX8 630 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 KPNA4O00629 521 aaPredicted RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 ULK1O75385 1050 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 PGM3O95394 542 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 NTSR2O95665 410 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 MNDAP41218 407 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 ACLYP53396 1101 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SPIRE1Q08AE8 756 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 IL27RAQ6UWB1 636 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 GALNT13Q8IUC8 556 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 CCDC33Q8N5R6 958 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 UXS1Q8NBZ7 420 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SPPL2BQ8TCT7 592 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 C2orf15Q8WU43 125 aaKnown RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 SGF29Q96ES7 293 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 GPER1Q99527 375 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 DNAJC28Q9NX36 388 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 PSMD13Q9UNM6 376 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 TSC22D4Q9Y3Q8 395 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 LYVE1Q9Y5Y7 322 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 CHST10O43529 356 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 TBL1XO60907 577 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 PLGP00747 810 aaPredicted RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 S100A9P06702 114 aaKnown RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 RARGP13631 454 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 ETS1P14921 441 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 GLUD2P49448 558 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 FASTKQ14296 549 aaKnown RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 PARP6Q2NL67 630 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 PCID2Q5JVF3 399 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 TPGS1Q6ZTW0 290 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 P4HA3Q7Z4N8 544 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 PROSER1Q86XN7 944 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 ABRAQ8N0Z2 381 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 GRIN3AQ8TCU5 1115 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 WNT8BQ93098 351 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 C5orf34Q96MH7 638 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 FAM111AQ96PZ2 611 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SORCS3Q9UPU3 1222 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SNX13Q9Y5W8 968 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 KHDRBS3O75525 346 aaKnown RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 FGF1P05230 155 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 IL12BP29460 328 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 ALDH3A2P51648 485 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 TAS2R41P59536 307 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SLC20A2Q08357 652 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 TCHHL1Q5QJ38 904 aaPredicted RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 TBCELQ5QJ74 424 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 NUP54Q7Z3B4 507 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 RASAL3Q86YV0 1011 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 UBR7Q8N806 425 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SLC22A18Q96BI1 424 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 TTPALQ9BTX7 342 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 TKTL2Q9H0I9 626 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SDHAF3Q9NRP4 125 aa6.96□□□□□ -1.3
CHD2-208ENST00000626874 SAMD4AQ9UPU9 718 aaKnown RBP6.96□□□□□ -1.3
CHD2-208ENST00000626874 BCL10O95999 233 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 APOC1P02654 83 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 IFNA6P05013 189 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 GLI1P08151 1106 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 PLEKP08567 350 aaPredicted RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 EPORP19235 508 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 LPOP22079 712 aaPredicted RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 TRAF3Q13114 568 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.95□□□□□ -1.31e-7■■■□□ 18.5
CHD2-208ENST00000626874 TAPT1Q6NXT6 567 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 DNAJB7Q7Z6W7 309 aaPredicted RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 DHFR2Q86XF0 187 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 SYTL5Q8TDW5 730 aaPredicted RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 TTYH1Q9H313 450 aaPredicted RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 LIMD1Q9UGP4 676 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 ERVK-11Q9UQG0 969 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 PCDHGB1Q9Y5G3 927 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 DNALI1O14645 258 aaPredicted RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 MTHFD1P11586 935 aaKnown RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 DDX6P26196 483 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHD2-208ENST00000626874 NDUFS1P28331 727 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 CRATP43155 626 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 STXBP1P61764 594 aaKnown RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 ZNF470Q6ECI4 717 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 CAPN13Q6MZZ7 669 aaPredicted RBP6.95□□□□□ -1.3
CHD2-208ENST00000626874 SPOCD1Q6ZMY3 1216 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 RFX8Q6ZV50 586 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 DAW1Q8N136 415 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 KAT2BQ92831 832 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 ACDQ96AP0 544 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 AP2M1Q96CW1 435 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 CDCA5Q96FF9 252 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 FRMD6Q96NE9 622 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 CCT8L2Q96SF2 557 aa6.95□□□□□ -1.3
CHD2-208ENST00000626874 TMEM27Q9HBJ8 222 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms