RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ADAM12O43184 909 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 KDM1AO60341 852 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 PDGFAP04085 211 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 CNPP09543 421 aaKnown RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 CCDC130P13994 396 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 EZRP15311 586 aaKnown RBP11.76□□□□□ -0.53
LINC00538-201ENST00000626109 TNFSF4P23510 183 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 BTKQ06187 659 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 GPR17Q13304 367 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 SLC14A1Q13336 389 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 PWP1Q13610 501 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 MAP7Q14244 749 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 CORO6Q6QEF8 472 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 ZNF783Q6ZMS7 281 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 PHLDB2Q86SQ0 1253 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 AGR3Q8TD06 166 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 PCED1BQ96HM7 432 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 KLHL5Q96PQ7 755 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 PKMYT1Q99640 499 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 SENP1Q9P0U3 644 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 KLHL14Q9P2G3 628 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 NAALADL1Q9UQQ1 740 aa11.76□□□□□ -0.53
LINC00538-201ENST00000626109 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 WDR27A2RRH5 827 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 HIDE1A8MVS5 230 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 RFXAPO00287 272 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 SOX1O00570 391 aaPredicted RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 CALCAP01258 141 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 S100A6P06703 90 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 RPSAP08865 295 aaKnown RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 KLRC2P26717 231 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 ADORA2BP29275 332 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 MAGEA4P43358 317 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 VPS41P49754 854 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 ALDH3A2P51648 485 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 COG7P83436 770 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 BLMHQ13867 455 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 PIGHQ14442 188 aaPredicted RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 LRRC14Q15048 493 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 CCDC142Q17RM4 750 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 GOLGA7BQ2TAP0 167 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 VSTM1Q6UX27 236 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 MEX3BQ6ZN04 569 aaKnown RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 UNC45BQ8IWX7 931 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 TMEM35BQ8NCS4 154 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 Q8NFD4 153 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 TOR1AIP2Q8NFQ8 470 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 SLC2A14Q8TDB8 520 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 C2orf15Q8WU43 125 aaKnown RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 TFAP2BQ92481 460 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 PPP2R3CQ969Q6 453 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 CCDC74AQ96AQ1 378 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 MRPL38Q96DV4 380 aaKnown RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 PGLYRP2Q96PD5 576 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 RBM15Q96T37 977 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 GAS2L1Q99501 681 aaPredicted RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 HNRNPABQ99729 332 aaKnown RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 IFT22Q9H7X7 185 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 TMLHEQ9NVH6 421 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 ABI2Q9NYB9 513 aaPredicted RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 TSPAN16Q9UKR8 245 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 ZNF148Q9UQR1 794 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 R3HDM2Q9Y2K5 976 aaKnown RBP11.75□□□□□ -0.53
LINC00538-201ENST00000626109 PCDHB5Q9Y5E4 795 aa11.75□□□□□ -0.53
LINC00538-201ENST00000626109 ARHGAP10A1A4S6 786 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 MTMR11A4FU01 709 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 DNALI1O14645 258 aaPredicted RBP11.74□□□□□ -0.53
LINC00538-201ENST00000626109 KPNA5O15131 536 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 LIASO43766 372 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 KCNJ13O60928 360 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 CPNE3O75131 537 aaKnown RBP11.74□□□□□ -0.53
LINC00538-201ENST00000626109 ZBED1O96006 694 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 PLATP00750 562 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 OAS1P00973 400 aaKnown RBP11.74□□□□□ -0.53
LINC00538-201ENST00000626109 ALAS2P22557 587 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 MMP8P22894 467 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 PSMA4P25789 261 aaKnown RBP11.74□□□□□ -0.53
LINC00538-201ENST00000626109 GDI1P31150 447 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 PTPN7P35236 360 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 TAS2R40P59535 323 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 ELF3P78545 371 aaPredicted RBP11.74□□□□□ -0.53
LINC00538-201ENST00000626109 RIPK1Q13546 671 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 MORF4L2Q15014 288 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 P3H1Q32P28 736 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 INAVAQ3KP66 663 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 UBAP2Q5T6F2 1119 aaKnown RBP11.74□□□□□ -0.53
LINC00538-201ENST00000626109 DCUN1D2Q6PH85 259 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 ANKS1BQ7Z6G8 1248 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 FAM35AQ86V20 835 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 C7orf57Q8NEG2 295 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 ZNF461Q8TAF7 563 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 SPPL2BQ8TCT7 592 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 LRCH3Q96II8 777 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 TUBA1CQ9BQE3 449 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 B3GNT5Q9BYG0 378 aa11.74□□□□□ -0.53
LINC00538-201ENST00000626109 FRMD8P1Q9BZ68 369 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms