RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NBPF12Q5TAG4 269 aaPredicted RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 UNC5BQ8IZJ1 945 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 FAM9CQ8IZT9 166 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 SNX31Q8N9S9 440 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 AZIN2Q96A70 460 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 ASB9Q96DX5 294 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 SLC10A4Q96EP9 437 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 KCTD15Q96SI1 283 aaPredicted RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 MYH11P35749 1972 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 ZNF197O14709 1029 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 HLA-DPA1P20036 260 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 RPS9P46781 194 aaKnown RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 HARS2P49590 506 aaKnown RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 SERPINH1P50454 418 aaKnown RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 ZBED5Q49AG3 693 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 PDCD4Q53EL6 469 aaKnown RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 CRTC3Q6UUV7 619 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 OFCC1Q8IZS5 231 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 MARVELD2Q8N4S9 558 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 RPRD1AQ96P16 312 aaPredicted RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 TMEM161AQ9NX61 479 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 FAM8A1Q9UBU6 413 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 TEKT2Q9UIF3 430 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 CDH9Q9ULB4 789 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 MYH1P12882 1939 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 MYH4Q9Y623 1939 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 DHX15O43143 795 aaKnown RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 FAM189A1O60320 539 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 FAM182AQ5T1J6 154 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 SLC27A1Q6PCB7 646 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 TIFABQ6ZNK6 161 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 TBCDQ9BTW9 1192 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 HGH1Q9BTY7 390 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 ELP3Q9H9T3 547 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 RAD51BO15315 384 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 IPO13O94829 963 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 AP2A1O95782 977 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 TOP3BO95985 862 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 EIF2S1P05198 315 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 IDO1P14902 403 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 LHX1P48742 406 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 CDH15P55291 814 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 SLCO6A1Q86UG4 719 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 C1orf127Q8N9H9 656 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 ZBTB8BQ8NAP8 495 aaPredicted RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 ACOX2Q99424 681 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 LIN28AQ9H9Z2 209 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 BTRCQ9Y297 605 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 TAF4O00268 1085 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 WNT10BO00744 389 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 BAG6P46379 1132 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 TWF1Q12792 350 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 PRKG2Q13237 762 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 FSCN1Q16658 493 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 AARS2Q5JTZ9 985 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 SPOUT1Q5T280 376 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 KCTD8Q6ZWB6 473 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 FSTL5Q8N475 847 aaPredicted RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 STX19Q8N4C7 294 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 STAG3L4Q8TBR4 150 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 GPR63Q9BZJ6 419 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 GIN1Q9NXP7 522 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 STX16-NPEPL1H3BU86 382 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS36-207ENST00000611132 MAPRE1Q15691 268 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 LDLRAP1Q5SW96 308 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 PMF1Q6P1K2 205 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 SZRD1Q7Z422 152 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 TMEM126BQ8IUX1 230 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 AADATQ8N5Z0 425 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 TRIM63Q969Q1 353 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 VTA1Q9NP79 307 aa14.74□□□□□ -0.05
VPS36-207ENST00000611132 EIF2B3Q9NR50 452 aaKnown RBP14.74□□□□□ -0.05
VPS36-207ENST00000611132 RECQL5O94762 991 aaPredicted RBP14.73□□□□□ -0.05
VPS36-207ENST00000611132 GPIP06744 558 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 AKAP5P24588 427 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 CCNIQ14094 377 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 SLC25A52Q3SY17 297 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 FAM45BPQ6NSW5 357 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 EPGNQ6UW88 154 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 SLC26A9Q7LBE3 791 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 ZNF567Q8N184 647 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 AMER2Q8N7J2 671 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 ATP6V0D2Q8N8Y2 350 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 CLEC4DQ8WXI8 215 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 CLDN25C9JDP6 229 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 PTPN9P43378 593 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 GMPSP49915 693 aaPredicted RBP14.73□□□□□ -0.05
VPS36-207ENST00000611132 TRAP1Q12931 704 aaKnown RBP14.73□□□□□ -0.05
VPS36-207ENST00000611132 TLR1Q15399 786 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 CA9Q16790 459 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 TEX12Q9BXU0 123 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 ARHGEF4Q9NR80 690 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 DTLQ9NZJ0 730 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 N4BP2Q86UW6 1770 aaPredicted RBP14.73□□□□□ -0.05
VPS36-207ENST00000611132 A0A1B0GVG6 124 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 C11orf91Q3C1V1 193 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 TEX44Q53QW1 395 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 PKN3Q6P5Z2 889 aa14.73□□□□□ -0.05
VPS36-207ENST00000611132 PNPT1Q8TCS8 783 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms