RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PSTKQ8IV42 348 aaKnown RBP14.84□□□□□ -0.03
FANCA-220ENST00000566409 TSC1Q92574 1164 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 RAB7BQ96AH8 199 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 ARHGEF26Q96DR7 871 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 TRIM11Q96F44 468 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 BTBD6Q96KE9 485 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 NSMCE3Q96MG7 304 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 CALN1Q9BXU9 219 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 CPEB1Q9BZB8 566 aaKnown RBP14.84□□□□□ -0.03
FANCA-220ENST00000566409 MRPL47Q9HD33 250 aaKnown RBP14.84□□□□□ -0.03
FANCA-220ENST00000566409 KLHL11Q9NVR0 708 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 UBA2Q9UBT2 640 aaPredicted RBP14.84□□□□□ -0.03
FANCA-220ENST00000566409 NENFQ9UMX5 172 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 SHROOM3Q8TF72 1996 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 FAM208BQ5VWN6 2430 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 ASXL3Q9C0F0 2248 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 TRIM38O00635 465 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 PIGNO95427 931 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 GIMD1P0DJR0 217 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 DGKAP23743 735 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 CASP14P31944 242 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 HCAR3P49019 387 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 SMAD1Q15797 465 aaKnown RBP14.83□□□□□ -0.04
FANCA-220ENST00000566409 SMTNL2Q2TAL5 461 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 DHRS13Q6UX07 377 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 TSEN2Q8NCE0 465 aaKnown RBP14.83□□□□□ -0.04
FANCA-220ENST00000566409 ZCCHC14Q8WYQ9 949 aaKnown RBP14.83□□□□□ -0.04
FANCA-220ENST00000566409 CENPTQ96BT3 561 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 LENG8Q96PV6 779 aaPredicted RBP14.83□□□□□ -0.04
FANCA-220ENST00000566409 XPO4Q9C0E2 1151 aaKnown RBP14.83□□□□□ -0.04
FANCA-220ENST00000566409 ETNK2Q9NVF9 386 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 DKK3Q9UBP4 350 aa14.83□□□□□ -0.04
FANCA-220ENST00000566409 LUC7L2Q9Y383 392 aaKnown RBP14.83□□□□□ -0.04
FANCA-220ENST00000566409 FAM149AA5PLN7 773 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 TMEM8BA6NDV4 472 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 ARHGAP42A6NI28 874 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 A6NNZ2 444 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 MUSKO15146 869 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 DAPK3O43293 454 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 MMP20O60882 483 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 CYP1A2P05177 515 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 RARAP10276 462 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 AMPD1P23109 780 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 ACADVLP49748 655 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 CLDN6P56747 220 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 RAD51Q06609 339 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 FZD2Q14332 565 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 ACAP1Q15027 740 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 DPYSL2Q16555 572 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 ZNF542PQ5EBM4 170 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 KYAT3Q6YP21 454 aaKnown RBP14.82□□□□□ -0.04
FANCA-220ENST00000566409 POLNQ7Z5Q5 900 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 PTAR1Q7Z6K3 402 aaPredicted RBP14.82□□□□□ -0.04
FANCA-220ENST00000566409 ZSWIM9Q86XI8 627 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 CAMK1DQ8IU85 385 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 ASB12Q8WXK4 309 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 SUV39H2Q9H5I1 410 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 DONSONQ9NYP3 566 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 KLF15Q9UIH9 416 aa14.82□□□□□ -0.04
FANCA-220ENST00000566409 SPTY2D1-AS1A0A0U1RR47 76 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 TSPAN11A1L157 253 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 SRRM3A6NNA2 597 aaPredicted RBP14.81□□□□□ -0.04
FANCA-220ENST00000566409 DFFAO00273 331 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 NEMP1O14524 444 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 SIGLEC6O43699 453 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 PIAS2O75928 621 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 PTMSP20962 102 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 HNRNPH3P31942 346 aaKnown RBP14.81□□□□□ -0.04
FANCA-220ENST00000566409 PFN3P60673 137 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 SLC25A11Q02978 314 aaKnown RBP14.81□□□□□ -0.04
FANCA-220ENST00000566409 SGCGQ13326 291 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 CAMK2BQ13554 666 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 PROX2Q3B8N5 592 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 BOLA3Q53S33 107 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 ALKBH5Q6P6C2 394 aaKnown RBP14.81□□□□□ -0.04
FANCA-220ENST00000566409 CPNE8Q86YQ8 564 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 NIPA2Q8N8Q9 360 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 IQCDQ96DY2 449 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 WRAP53Q9BUR4 548 aaKnown RBP14.81□□□□□ -0.04
FANCA-220ENST00000566409 NUP85Q9BW27 656 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 ZWILCHQ9H900 591 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 MBNL1Q9NR56 388 aaKnown RBP14.81□□□□□ -0.04
FANCA-220ENST00000566409 PNMA8BQ9ULN7 279 aaPredicted RBP14.81□□□□□ -0.04
FANCA-220ENST00000566409 PCDHGA1Q9Y5H4 931 aa14.81□□□□□ -0.04
FANCA-220ENST00000566409 FPGTO14772 594 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 PALMO75781 387 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 PEX11BO96011 259 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 IL4RP24394 825 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 RABIFP47224 123 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 CSNK1DP48730 415 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 ZNF135P52742 658 aaPredicted RBP14.8□□□□□ -0.04
FANCA-220ENST00000566409 SEMG2Q02383 582 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 IL10RBQ08334 325 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
FANCA-220ENST00000566409 PIGHQ14442 188 aaPredicted RBP14.8□□□□□ -0.04
FANCA-220ENST00000566409 NFKBIBQ15653 356 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 UGP2Q16851 508 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 TMEM52BQ4KMG9 183 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 CCDC122Q5T0U0 273 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 SRLQ86TD4 932 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms