RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 POLD3Q15054 466 aaPredicted RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 PIP5KL1Q5T9C9 394 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 PEX26Q7Z412 305 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 KATNAL2Q8IYT4 538 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 RCOR2Q8IZ40 523 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 DCAF4L2Q8NA75 395 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 ATP11CQ8NB49 1132 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 SAP25Q8TEE9 199 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 FAF2Q96CS3 445 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 ZNF830Q96NB3 372 aaPredicted RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 ALS2CR12Q96Q35 445 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 ELF4Q99607 663 aaPredicted RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 CDC6Q99741 560 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 CALN1Q9BXU9 219 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 LZTFL1Q9NQ48 299 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 NDFIP2Q9NV92 336 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 DNAI1Q9UI46 699 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 HPCAL4Q9UM19 191 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 HS3ST2Q9Y278 367 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 PCDHA3Q9Y5H8 950 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 A0A0U1RQJ8 604 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 ZSCAN5CA6NGD5 496 aaPredicted RBP15.91■□□□□ 0.14
USB1-208ENST00000563207 TLR4O00206 839 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 ZRANB2O95218 330 aaKnown RBP eCLIP15.91■□□□□ 0.14
USB1-208ENST00000563207 PRLRP16471 622 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 CTNNA2P26232 953 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 GRK6P43250 576 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 GEMIN4P57678 1058 aaKnown RBP15.91■□□□□ 0.14
USB1-208ENST00000563207 NXPH1P58417 271 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 ANKRD20A8PQ5CZ79 823 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 TMCO3Q6UWJ1 677 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 DHRS13Q6UX07 377 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 TMPRSS7Q7RTY8 843 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 NT5DC3Q86UY8 548 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 EID2Q8N6I1 236 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 TRIM58Q8NG06 486 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 EXD1Q8NHP7 514 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 ARHGEF2Q92974 986 aaKnown RBP15.91■□□□□ 0.14
USB1-208ENST00000563207 RBM41Q96IZ5 413 aaKnown RBP15.91■□□□□ 0.14
USB1-208ENST00000563207 GOLPH3Q9H4A6 298 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 FZD3Q9NPG1 666 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 HYOU1Q9Y4L1 999 aa15.91■□□□□ 0.14
USB1-208ENST00000563207 LRRD1A4D1F6 860 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 GOLGA6L9A6NEM1 432 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 KPNA3O00505 521 aaPredicted RBP15.9■□□□□ 0.14
USB1-208ENST00000563207 TNFSF14O43557 240 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 ZMPSTE24O75844 475 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 ZFXP17010 805 aaPredicted RBP15.9■□□□□ 0.14
USB1-208ENST00000563207 CHRNA3P32297 505 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 COPS2P61201 443 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 SFSWAPQ12872 951 aaKnown RBP15.9■□□□□ 0.14
USB1-208ENST00000563207 ARSIQ5FYB1 569 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 NAPEPLDQ6IQ20 393 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 RETSATQ6NUM9 610 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 C19orf48Q6RUI8 117 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 KANSL1Q7Z3B3 1105 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 PROSER1Q86XN7 944 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 LRRC49Q8IUZ0 686 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 UBL4BQ8N7F7 174 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 GRIN3AQ8TCU5 1115 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 RAPGEF5Q92565 580 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 SPON2Q9BUD6 331 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 MAK16Q9BXY0 300 aaKnown RBP15.9■□□□□ 0.14
USB1-208ENST00000563207 LRRC19Q9H756 370 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 ATP13A1Q9HD20 1204 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 CAPN6Q9Y6Q1 641 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 PKD1L2Q7Z442 2459 aa15.9■□□□□ 0.14
USB1-208ENST00000563207 COL5A1P20908 1838 aaPredicted RBP15.89■□□□□ 0.13
USB1-208ENST00000563207 ARHGAP42A6NI28 874 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 C3orf70A6NLC5 250 aaPredicted RBP15.89■□□□□ 0.13
USB1-208ENST00000563207 RASA4BC9J798 803 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 SLC31A1O15431 190 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 RASA4O43374 803 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 KDELR3O43731 214 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 RNGTTO60942 597 aaKnown RBP15.89■□□□□ 0.13
USB1-208ENST00000563207 SDC3O75056 442 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 CD160O95971 181 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 KRT1P04264 644 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 ITGAVP06756 1048 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 CD48P09326 243 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 TNNT1P13805 278 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 AMPD1P23109 780 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 ACVRL1P37023 503 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 CETN2P41208 172 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 CLCN6P51797 869 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 RWDD2BP57060 319 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 ARF5P84085 180 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 TAZQ16635 292 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 FAM46CQ5VWP2 391 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 AFMIDQ63HM1 303 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 LEKR1Q6ZMV7 388 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 DPY19L3Q6ZPD9 716 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 PRPF39Q86UA1 669 aaKnown RBP15.89■□□□□ 0.13
USB1-208ENST00000563207 RNF157Q96PX1 679 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 NOL6Q9H6R4 1146 aaKnown RBP15.89■□□□□ 0.13
USB1-208ENST00000563207 GDF3Q9NR23 364 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 FTSJ1Q9UET6 329 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 EFR3BQ9Y2G0 817 aa15.89■□□□□ 0.13
USB1-208ENST00000563207 ADAMTS20P59510 1910 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms