RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SLC2A11Q9BYW1 496 aa13.92□□□□□ -0.18
TPM1-215ENST00000558868 IQCGQ9H095 443 aaKnown RBP13.92□□□□□ -0.18
TPM1-215ENST00000558868 CERS4Q9HA82 394 aa13.92□□□□□ -0.18
TPM1-215ENST00000558868 NOD2Q9HC29 1040 aa13.92□□□□□ -0.18
TPM1-215ENST00000558868 SPHK2Q9NRA0 654 aa13.92□□□□□ -0.18
TPM1-215ENST00000558868 MKS1Q9NXB0 559 aa13.92□□□□□ -0.18
TPM1-215ENST00000558868 RIMKLBQ9ULI2 386 aa13.92□□□□□ -0.18
TPM1-215ENST00000558868 CCL26Q9Y258 94 aa13.92□□□□□ -0.18
TPM1-215ENST00000558868 FOXO6A8MYZ6 492 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 COPEO14579 308 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 SNAP91O60641 907 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 UGT1A9O60656 530 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 SPAG7O75391 227 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 PENKP01210 267 aaPredicted RBP13.91□□□□□ -0.18
TPM1-215ENST00000558868 ATXN1LP0C7T5 689 aaKnown RBP13.91□□□□□ -0.18
TPM1-215ENST00000558868 CEBPBP17676 345 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 CCNFP41002 786 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 CHRNA4P43681 627 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 CSNK1DP48730 415 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 AP1S1P61966 158 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 SULT2A1Q06520 285 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 LMAN2Q12907 356 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 PLEKHG6Q3KR16 790 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 HSP90AA5PQ58FG0 334 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 TSTD2Q5T7W7 516 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 HHATQ5VTY9 493 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 STRA8Q7Z7C7 330 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 ARID3BQ8IVW6 561 aaPredicted RBP13.91□□□□□ -0.18
TPM1-215ENST00000558868 LMNTD2Q8IXW0 634 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 DENND1AQ8TEH3 1009 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 CKAP2Q8WWK9 683 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 IRF7Q92985 503 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 ATP2A3Q93084 1043 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 BHMTQ93088 406 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 MRPL38Q96DV4 380 aaKnown RBP13.91□□□□□ -0.18
TPM1-215ENST00000558868 NSRP1Q9H0G5 558 aaKnown RBP13.91□□□□□ -0.18
TPM1-215ENST00000558868 UGT1A7Q9HAW7 530 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 UGT1A10Q9HAW8 530 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 UGT1A8Q9HAW9 530 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 TREX1Q9NSU2 369 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 ABCB8Q9NUT2 735 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 MARK1Q9P0L2 795 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 LHX3Q9UBR4 397 aa13.91□□□□□ -0.18
TPM1-215ENST00000558868 MIA3Q5JRA6 1907 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.9□□□□□ -0.18
TPM1-215ENST00000558868 TTC24A2A3L6 582 aaPredicted RBP13.9□□□□□ -0.18
TPM1-215ENST00000558868 SIN3BO75182 1162 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 PRAMEF12O95522 483 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 CRTAMO95727 393 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 PYGBP11216 843 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 CCT5P48643 541 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 POLD2P49005 469 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 PDE1BQ01064 536 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 MPP2Q14168 576 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 MROH9Q5TGP6 573 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 NCEH1Q6PIU2 408 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 LINGO4Q6UY18 593 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 KIAA0408Q6ZU52 694 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 SRLQ86TD4 932 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 CNTN4Q8IWV2 1026 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 UNC5BQ8IZJ1 945 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 APCDD1Q8J025 514 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 WFDC5Q8TCV5 224 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 BRSK1Q8TDC3 778 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 BCAS4Q8TDM0 211 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 GDPD5Q8WTR4 605 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 CHMP6Q96FZ7 201 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 SERAC1Q96JX3 654 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 CABS1Q96KC9 395 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 MAGEB18Q96M61 343 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 TRIB3Q96RU7 358 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 RBBP8Q99708 897 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 BBS2Q9BXC9 721 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
TPM1-215ENST00000558868 SLC25A13Q9UJS0 675 aa13.9□□□□□ -0.18
TPM1-215ENST00000558868 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 MROH6A6NGR9 719 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 NDUFAB1O14561 156 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 SLC7A4O43246 635 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 RFPL1O75677 317 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 VAPBO95292 243 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 ASMTLO95671 621 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 CD160O95971 181 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 FAM107AO95990 144 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 ITGA2BP08514 1039 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 FSHRP23945 695 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 RPA3P35244 121 aaPredicted RBP13.89□□□□□ -0.19
TPM1-215ENST00000558868 RGRP47804 291 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 SERPINB8P50452 374 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 LIMK2P53671 638 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 BMPR2Q13873 1038 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 KCNC3Q14003 757 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 IHHQ14623 411 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 LRRC14Q15048 493 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 CNGA3Q16281 694 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 PITRM1Q5JRX3 1037 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 ESRP1Q6NXG1 681 aaKnown RBP13.89□□□□□ -0.19
TPM1-215ENST00000558868 TMC5Q6UXY8 1006 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 SH2D5Q6ZV89 423 aa13.89□□□□□ -0.19
TPM1-215ENST00000558868 TMEM25Q86YD3 366 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms