RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RAP2CQ9Y3L5 183 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 ARL5AQ9Y689 179 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 MT-ND1P03886 318 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 AKR1A1P14550 325 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 RGS2P41220 211 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 ARSDP51689 593 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 USP46P62068 366 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 MS4A2Q01362 244 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 FUT11Q495W5 492 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 LINC00523Q86TU6 105 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 KCTD13Q8WZ19 329 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 EME1Q96AY2 570 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 OLFM1Q99784 485 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 RTP3Q9BQQ7 232 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 BPIFA1Q9NP55 256 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 DNAJB4Q9UDY4 337 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 PCDHGB4Q9UN71 923 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 GABRQQ9UN88 632 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 PCDHGB5Q9Y5G0 923 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 HS3ST4Q9Y661 456 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 MTSS1O43312 755 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 OR1E1P30953 314 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 ALDH1A3P47895 512 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 ECT2LQ008S8 904 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 PRKAA1Q13131 559 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 PFKFB4Q16877 469 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 APBB2Q92870 758 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 ATP6V1E2Q96A05 226 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 FAM96AQ9H5X1 160 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 TNFRSF12AQ9NP84 129 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 OSER1Q9NX31 292 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 DNAJC28Q9NX36 388 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 EGFL7Q9UHF1 273 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 ABT1Q9ULW3 272 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 RGPD3A6NKT7 1758 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 RGPD4Q7Z3J3 1758 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 GPR182O15218 404 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 IRAK2O43187 625 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 HARS2P49590 506 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 SCNN1BP51168 640 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 CSE1LP55060 971 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 TBCCQ15814 346 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 ABI1Q8IZP0 508 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 OR13C4Q8NGS5 318 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 ANKRD49Q8WVL7 239 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 FBXO32Q969P5 355 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 NT5C3BQ969T7 300 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 SERPINI1Q99574 410 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 SEMA3CQ99985 751 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 COPG1Q9Y678 874 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 RGSL1A5PLK6 1076 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 LRPAP1P30533 357 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 ACVRL1P37023 503 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 FLT3LGP49771 235 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 GATMP50440 423 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 CDK7P50613 346 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 GEMP55040 296 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 FOLH1Q04609 750 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 ZNF235Q14590 738 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 FAM171A1Q5VUB5 890 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 FAM117BQ6P1L5 589 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 KLC3Q6P597 504 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 TMEM86AQ8N2M4 240 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 KCNA7Q96RP8 456 aa13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 MRPL1Q9BYD6 325 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 MRPL46Q9H2W6 279 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 MARCH4Q9P2E8 410 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-209ENST00000548825 MATN2O00339 956 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 NR5A2O00482 541 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 MAFKO60675 156 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 FKBP6O75344 327 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 TOMM70O94826 608 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 VCLP18206 1134 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 PPARGP37231 505 aaPredicted RBP13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 TBX4P57082 545 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 KCNA10Q16322 511 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 UGP2Q16851 508 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 INSCQ1MX18 579 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 ZYG11AQ6WRX3 759 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 ZNF467Q7Z7K2 595 aaPredicted RBP13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 PRPF18Q99633 342 aaKnown RBP13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.2
PRPF40B-209ENST00000548825 FAM149AA5PLN7 773 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 F8W8V4 182 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 ZNF195O14628 629 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 B4GALT3O60512 393 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 ITGB6P18564 788 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 CCNG1P51959 295 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 CEACAM7Q14002 265 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 FASTKQ14296 549 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 CAPRIN1Q14444 709 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 SATL1Q86VE3 508 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 RSPH1Q8WYR4 309 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 GPR22Q99680 433 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms