RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	DLGAP2	Q9P1A6	1054 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.15	□□□□□ -1.75
RDX-208	ENST00000530085	ING1	Q9UK53	422 aa	Predicted RBP	4.15	□□□□□ -1.75
RDX-208	ENST00000530085	FAM96B	Q9Y3D0	163 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	UTY	O14607	1347 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	WDR17	Q8IZU2	1322 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	KAT6A	Q92794	2004 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085		A0A096LPK6	155 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	KIR2DS5	A0A0G2JLQ3	304 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085		A0A1W2PQ09	198 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	C17orf102	A2RUQ5	167 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SYNDIG1L	A6NDD5	238 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085		A8MZ25	164 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	BTBD18	B2RXH4	712 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	KIR2DS3	K7RE56	304 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	PRPF4	O43172	522 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	ERAL1	O75616	437 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	IPO7	O95373	1038 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	TOP3B	O95985	862 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	MT-CYB	P00156	380 aa	Predicted RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	HOXB5	P09067	269 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	PRR35	P0CG20	571 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	NR2F1	P10589	423 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	UNG	P13051	313 aa	Predicted RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	CTPS1	P17812	591 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	BMP5	P22003	454 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	MCM3	P25205	808 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	GCH1	P30793	250 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	HDAC4	P56524	1084 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SNX16	P57768	344 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	CFHR1	Q03591	330 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	DPT	Q07507	201 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	KLF10	Q13118	480 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	ALG11	Q2TAA5	492 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	MIDN	Q504T8	468 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	RAB41	Q5JT25	222 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	KRT74	Q7RTS7	529 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SERPINA11	Q86U17	422 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF575	Q86XF7	245 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	TDRP	Q86YL5	185 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	DDIAS	Q8IXT1	998 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	ZDHHC23	Q8IYP9	409 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SLC25A41	Q8N5S1	370 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	PABPC5	Q96DU9	382 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	YME1L1	Q96TA2	773 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SLF1	Q9BQI6	1058 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SCNM1	Q9BWG6	230 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	MAK16	Q9BXY0	300 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	NUF2	Q9BZD4	464 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	KIF9	Q9HAQ2	790 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	WDR6	Q9NNW5	1121 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SPAG4	Q9NPE6	437 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	RRP7BP	Q9NSQ0	103 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	PLK2	Q9NYY3	685 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	ABI3	Q9P2A4	366 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	CNOT8	Q9UFF9	292 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	MTMR6	Q9Y217	621 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	CARD8	Q9Y2G2	431 aa		4.14	□□□□□ -1.75
RDX-208	ENST00000530085	LSM4	Q9Y4Z0	139 aa	Known RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.14	□□□□□ -1.75
RDX-208	ENST00000530085	COL11A2	P13942	1736 aa	Predicted RBP	4.13	□□□□□ -1.75
RDX-208	ENST00000530085	FAM237A	A0A1B0GTK4	181 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	TYW5	A2RUC4	315 aa	Known RBP	4.13	□□□□□ -1.75
RDX-208	ENST00000530085	FAM90A8P	A6NJQ4	464 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	LINC01548	A6NM66	108 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	KLRF2	D3W0D1	207 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	HSPB6	O14558	160 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SCAMP1	O15126	338 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	LATS1	O95835	1130 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	DNTT	P04053	509 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	CLTB	P09497	229 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	FAM90A13P	P0C7W8	464 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	FAM90A24P	P0C7X0	464 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	PCNA	P12004	261 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	ITGAX	P20702	1163 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	NNMT	P40261	264 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	GPR12	P47775	334 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	CXCR3	P49682	368 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	INHBC	P55103	352 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	COL10A1	Q03692	680 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	GRIK3	Q13003	919 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	RUNX2	Q13950	521 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SHB	Q15464	509 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	CCDC96	Q2M329	555 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SLC9C1	Q4G0N8	1177 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	ENTPD8	Q5MY95	495 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	JADE1	Q6IE81	842 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.13	□□□□□ -1.75
RDX-208	ENST00000530085	KDELC2	Q7Z4H8	507 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	PRPF39	Q86UA1	669 aa	Known RBP	4.13	□□□□□ -1.75
RDX-208	ENST00000530085	TICAM1	Q8IUC6	712 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	LURAP1L	Q8IV03	231 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	FAM185A	Q8N0U4	392 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	TMTC2	Q8N394	836 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	DPP10	Q8N608	796 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	MCPH1	Q8NEM0	835 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	HASPIN	Q8TF76	798 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms