RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 STN1Q9H668 368 aaKnown RBP7.56□□□□□ -1.2
CTNND1-217ENST00000527599 GAREM1Q9H706 876 aa7.56□□□□□ -1.2
CTNND1-217ENST00000527599 RRP7AQ9Y3A4 280 aaKnown RBP7.56□□□□□ -1.2
CTNND1-217ENST00000527599 ADGRF5Q8IZF2 1346 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 PCF11O94913 1555 aaKnown RBP7.55□□□□□ -1.2
CTNND1-217ENST00000527599 SAMD9Q5K651 1589 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 FAM90A7PA6NKC0 464 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 FAM90A22PA8MWA6 464 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 FAM90A12PA8MX19 464 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 FAM90A23PA8MXZ1 464 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 DHRS4L1P0CG22 281 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 KIF19Q2TAC6 998 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 FAM76BQ5HYJ3 339 aa7.55□□□□□ -1.2
CTNND1-217ENST00000527599 LILRB1Q8NHL6 650 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-217ENST00000527599 EIF4G3O43432 1585 aaKnown RBP7.54□□□□□ -1.2
CTNND1-217ENST00000527599 MAP3K1Q13233 1512 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 PLSCR5A0PG75 271 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 LDHAP00338 332 aaKnown RBP7.54□□□□□ -1.2
CTNND1-217ENST00000527599 PLEKHO1Q53GL0 409 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-217ENST00000527599 TYW3Q6IPR3 259 aaKnown RBP7.54□□□□□ -1.2
CTNND1-217ENST00000527599 DENND6AQ8IWF6 608 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 ZNF114Q8NC26 417 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 DNAAF1Q8NEP3 725 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 COG8Q96MW5 612 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 RPS6KC1Q96S38 1066 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.54□□□□□ -1.2
CTNND1-217ENST00000527599 ERCC6Q03468 1493 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 TIAM1Q13009 1591 aa7.54□□□□□ -1.2
CTNND1-217ENST00000527599 A0A0U1RQJ8 604 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 NBNO60934 754 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 CNPP09543 421 aaKnown RBP7.53□□□□□ -1.2
CTNND1-217ENST00000527599 ADCK5Q3MIX3 580 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 SETMARQ53H47 684 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-217ENST00000527599 RETSATQ6NUM9 610 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 MB21D2Q8IYB1 491 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-217ENST00000527599 PGBD5Q8N414 524 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 NKAPQ8N5F7 415 aaKnown RBP7.53□□□□□ -1.2
CTNND1-217ENST00000527599 ZMIZ2Q8NF64 920 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 TMEM170AQ8WVE7 144 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 RNF183Q96D59 192 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 ARPC5LQ9BPX5 153 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 KCNG2Q9UJ96 466 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 GDAQ9Y2T3 454 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 GRIN2BQ13224 1484 aa7.53□□□□□ -1.2
CTNND1-217ENST00000527599 VWA3AA6NCI4 1184 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 SLC16A5O15375 505 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 CHRM4P08173 479 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 HMGB1P09429 215 aaKnown RBP7.52□□□□□ -1.21
CTNND1-217ENST00000527599 ST3GAL1Q11201 340 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 ZNF628Q5EBL2 1059 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 EFHC1Q5JVL4 640 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 C9orf50Q5SZB4 431 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 PRSS45Q7RTY3 260 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 C2CD5Q86YS7 1000 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 AADATQ8N5Z0 425 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 RAB40AQ8WXH6 277 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 TRIB2Q92519 343 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 PKP4Q99569 1192 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 ENTPD7Q9NQZ7 604 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 ANKRD10Q9NXR5 420 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 ZNF608Q9ULD9 1512 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-217ENST00000527599 FHAD1B1AJZ9 1412 aa7.52□□□□□ -1.21
CTNND1-217ENST00000527599 AQRO60306 1485 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTNND1-217ENST00000527599 KLK10O43240 276 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 ZNF432O94892 652 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 VNN2O95498 520 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 MYF6P23409 242 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 MT3P25713 68 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 LIFRP42702 1097 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 MYBPHQ13203 477 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 SLC39A14Q15043 492 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 SF3B4Q15427 424 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTNND1-217ENST00000527599 CHD1LQ86WJ1 897 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 ARRDC2Q8TBH0 407 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 GDPD5Q8WTR4 605 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 SPATS2LQ9NUQ6 558 aaKnown RBP7.51□□□□□ -1.21
CTNND1-217ENST00000527599 LRRIQ1Q96JM4 1722 aa7.51□□□□□ -1.21
CTNND1-217ENST00000527599 FYCO1Q9BQS8 1478 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-217ENST00000527599 CBY3A6NI87 242 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 NPIPB11E5RHQ5 1161 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 PEX12O00623 359 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 ANP32CO43423 234 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 AFPP02771 609 aaKnown RBP7.5□□□□□ -1.21
CTNND1-217ENST00000527599 WEE2P0C1S8 567 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 RYKP34925 604 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 RPL3P39023 403 aaKnown RBP7.5□□□□□ -1.21
CTNND1-217ENST00000527599 ILF3Q12906 894 aaKnown RBP eCLIP7.5□□□□□ -1.21
CTNND1-217ENST00000527599 OS9Q13438 667 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-217ENST00000527599 DHX34Q14147 1143 aaKnown RBP7.5□□□□□ -1.21
CTNND1-217ENST00000527599 FAM69BQ5VUD6 431 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 C17orf99Q6UX52 265 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 CCDC129Q6ZRS4 1044 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 TWNKQ96RR1 684 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 MROH8Q9H579 483 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 SLC32A1Q9H598 525 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 RETREG1Q9H6L5 497 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 OR6C3Q9NZP0 311 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 FHOD3Q2V2M9 1422 aa7.5□□□□□ -1.21
CTNND1-217ENST00000527599 IQGAP2Q13576 1575 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms