RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 CGNL1Q0VF96 1302 aa4.44□□□□□ -1.7
CTHRC1-204ENST00000520880 FMN2Q9NZ56 1722 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 LOC102724159A0A0B4J2E5 919 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 LINC01553A4QN01 128 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 LGALS16A8MUM7 142 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 EFCAB8A8MWE9 144 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 DDAH2O95865 285 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 TECP42680 631 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 CLCNKBP51801 687 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 DLX5P56178 289 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 PICALMQ13492 652 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 WDR43Q15061 677 aaKnown RBP eCLIP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 PWP2Q15269 919 aaKnown RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 KIF19Q2TAC6 998 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 ZNF672Q499Z4 452 aaPredicted RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 ATPAF1Q5TC12 328 aaPredicted RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 ATG9BQ674R7 924 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 PALB2Q86YC2 1186 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 ZDHHC23Q8IYP9 409 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 ARRDC3Q96B67 414 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 TNIP3Q96KP6 325 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 GFM1Q96RP9 751 aaKnown RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 CDK19Q9BWU1 502 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 ABHD16BQ9H3Z7 469 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 SEL1LQ9UBV2 794 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 ERRFI1Q9UJM3 462 aaPredicted RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 OSGIN2Q9Y236 505 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 SRPRBQ9Y5M8 271 aaKnown RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 PTCH1Q13635 1447 aa4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 MARF1Q9Y4F3 1742 aaKnown RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 NKTRP30414 1462 aaKnown RBP4.43□□□□□ -1.7
CTHRC1-204ENST00000520880 USP54Q70EL1 1684 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 IGLV5-52A0A0A0MRZ9 124 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 IGHV4-28A0A0C4DH34 117 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 C17orf102A2RUQ5 167 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 DDTLA6NHG4 134 aaPredicted RBP4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 PPM1GO15355 546 aaPredicted RBP4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 FFAR2O15552 330 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 RNMTO43148 476 aaKnown RBP4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 ENO3P13929 434 aaPredicted RBP4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 PNLIPRP1P54315 467 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 TUBA1BP68363 451 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 POU5F1BQ06416 359 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 CPSF1Q10570 1443 aaKnown RBP4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 TTC22Q5TAA0 569 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 EDC4Q6P2E9 1401 aaKnown RBP4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 PPIP5K1Q6PFW1 1433 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 MON1BQ7L1V2 547 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 SERPINA11Q86U17 422 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 WDR5BQ86VZ2 330 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 FAM186BQ8IYM0 893 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 TCP11L2Q8N4U5 519 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 TEX45Q8NA69 505 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 SCAMP5Q8TAC9 235 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 EID2BQ96D98 161 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 PIGSQ96S52 555 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 IFT27Q9BW83 186 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 ELAC1Q9H777 363 aaKnown RBP4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 PRDM8Q9NQV8 689 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 KLQ9UEF7 1012 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 DLG5Q8TDM6 1919 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 KIF26BQ2KJY2 2108 aa4.42□□□□□ -1.7
CTHRC1-204ENST00000520880 TMEM247A6NEH6 219 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 ACTL6BO94805 426 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 ITGA2BP08514 1039 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 SNRNP70P08621 437 aaKnown RBP4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 RFC1P35251 1148 aaPredicted RBP4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 BTKQ06187 659 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 DCTN1Q14203 1278 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 MYBPC2Q14324 1141 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 RPS6KA2Q15349 733 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 LRRC24Q50LG9 513 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 WBP2NLQ6ICG8 309 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 RAB11FIP2Q7L804 512 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 SLC44A2Q8IWA5 706 aaPredicted RBP4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 CCDC146Q8IYE0 955 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 IGSF21Q96ID5 467 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 DUX5Q96PT3 197 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 SLC25A33Q9BSK2 321 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 CADM1Q9BY67 442 aaKnown RBP4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 LHPPQ9H008 270 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 CLPBQ9H078 707 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 ACAD9Q9H845 621 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 ARNT2Q9HBZ2 717 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 ARFGAP3Q9NP61 516 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 TERF2IPQ9NYB0 399 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 UPB1Q9UBR1 384 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 AGO1Q9UL18 857 aaKnown RBP4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 C19orf53Q9UNZ5 99 aaPredicted RBP4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 PIK3C2AO00443 1686 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 LRRC7Q96NW7 1537 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 PEAK1Q9H792 1746 aa4.41□□□□□ -1.7
CTHRC1-204ENST00000520880 SYN3O14994 580 aa4.4□□□□□ -1.71
CTHRC1-204ENST00000520880 ITM2AO43736 263 aa4.4□□□□□ -1.71
CTHRC1-204ENST00000520880 CAND2O75155 1236 aa4.4□□□□□ -1.71
CTHRC1-204ENST00000520880 KRT18P05783 430 aaKnown RBP4.4□□□□□ -1.71
CTHRC1-204ENST00000520880 SERPINA4P29622 427 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms