RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 RALGPS1Q5JS13 557 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 TTC27Q6P3X3 843 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 PRUNE1Q86TP1 453 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 MAML2Q8IZL2 1156 aaPredicted RBP15.12■□□□□ 0.01
NUP54-213ENST00000513352 C12orf50Q8NA57 414 aaPredicted RBP15.12■□□□□ 0.01
NUP54-213ENST00000513352 ATL2Q8NHH9 583 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 SPATA22Q8NHS9 363 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 ARRDC2Q8TBH0 407 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 GRK7Q8WTQ7 553 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 RLN3Q8WXF3 142 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 ARRDC3Q96B67 414 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 LRIG1Q96JA1 1093 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 SPACA7Q96KW9 195 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 SUV39H2Q9H5I1 410 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 CD93Q9NPY3 652 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 FBXO4Q9UKT5 387 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 SCML1Q9UN30 329 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 ZNF318Q5VUA4 2279 aa15.12■□□□□ 0.01
NUP54-213ENST00000513352 ZNF500O60304 480 aaPredicted RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 ZNF217O75362 1048 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 PMPCBO75439 489 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 GCATO75600 419 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 ECEL1O95672 775 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 MT-CYBP00156 380 aaPredicted RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 CPP00450 1065 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 ZSCAN5DPP0CG00 497 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 ITGB7P26010 798 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 VPS41P49754 854 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 TPMTP51580 245 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 NEK3P51956 506 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 EPHB1P54762 984 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 GEMP55040 296 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 SKOR1P84550 965 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 CNTN1Q12860 1018 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 TRAF2Q12933 501 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 TUBB2AQ13885 445 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 TRIP13Q15645 432 aaPredicted RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 KCTD19Q17RG1 926 aaPredicted RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 WHAMMP3Q1A5X7 153 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 P3H1Q32P28 736 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 USP39Q53GS9 565 aaKnown RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 FAXCQ5TGI0 409 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 ALG1LQ6GMV1 187 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 FBXL19Q6PCT2 694 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 PARS2Q7L3T8 475 aaKnown RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 KDELC2Q7Z4H8 507 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 AADATQ8N5Z0 425 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 RTP4Q96DX8 246 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 IFT43Q96FT9 208 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 IMP4Q96G21 291 aaKnown RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 ZNF641Q96N77 438 aaPredicted RBP15.11■□□□□ 0.01
NUP54-213ENST00000513352 TUBB2BQ9BVA1 445 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 SERGEFQ9UGK8 458 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 EBF1Q9UH73 591 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 FAM153AQ9UHL3 310 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 RAI2Q9Y5P3 530 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 MRFAP1Q9Y605 127 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 EML5Q05BV3 1969 aa15.11■□□□□ 0.01
NUP54-213ENST00000513352 NUMA1Q14980 2115 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 PRR23AA6NEV1 266 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 C16orf96A6NNT2 1141 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 CCDC188H7C350 402 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 SOCS5O75159 536 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 ANXA9O76027 345 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 GAS8O95995 478 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 MMP2P08253 660 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 SP9P0CG40 484 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 P2RY2P41231 377 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 TERF1P54274 439 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 CCDC15Q0P6D6 951 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 PPP1R7Q15435 360 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 LRRC73Q5JTD7 316 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 ARMC12Q5T9G4 340 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 ERN2Q76MJ5 926 aaKnown RBP15.1■□□□□ 0.01
NUP54-213ENST00000513352 WDR5BQ86VZ2 330 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 LONP2Q86WA8 852 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 IPMKQ8NFU5 416 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 NSMCE3Q96MG7 304 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 RUNDC3BQ96NL0 473 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 FCRL5Q96RD9 977 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 KRT12Q99456 494 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 FSD1LQ9BXM9 530 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 NEUROG2Q9H2A3 272 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 USP36Q9P275 1121 aaKnown RBP15.1■□□□□ 0.01
NUP54-213ENST00000513352 PAK5Q9P286 719 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 CHKBQ9Y259 395 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 PCDHB9Q9Y5E1 797 aa15.1■□□□□ 0.01
NUP54-213ENST00000513352 GOLGA6CA6NDK9 693 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 GOLGA6BA6NDN3 693 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 FAM47DPA6NHR8 397 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 E7EVH7 732 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 NEMP1O14524 444 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 NDUFS2O75306 463 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 KRT14P02533 472 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 GOLGA6DP0CG33 693 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 TDGF1P13385 188 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 HOXA6P31267 233 aa15.09■□□□□ 0.01
NUP54-213ENST00000513352 RPL22P35268 128 aaKnown RBP15.09■□□□□ 0.01
NUP54-213ENST00000513352 DRD3P35462 400 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms