RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SALL4Q9UJQ4 1053 aa20.22■□□□□ 0.83
UBE2D3-220ENST00000505307 NBEAQ8NFP9 2946 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 SPINT1O43278 529 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 AQP9O43315 295 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 TM7SF2O76062 418 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 JUNDP17535 347 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 ACTN2P35609 894 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 EIF2S3P41091 472 aaKnown RBP20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 NDST2P52849 883 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 THOP1P52888 689 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 ELP6Q0PNE2 266 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 CDCP2Q5VXM1 449 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 SNIP1Q8TAD8 396 aaKnown RBP20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 FGF11Q92914 225 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 DCBLD2Q96PD2 775 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 DEPDC7Q96QD5 511 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 ABCG4Q9H172 646 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 SPASTQ9UBP0 616 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 UBA2Q9UBT2 640 aaPredicted RBP20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 GGT7Q9UJ14 662 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 ITM2BQ9Y287 266 aa20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 TDRD6O60522 2096 aaKnown RBP20.21■□□□□ 0.83
UBE2D3-220ENST00000505307 XPAP23025 273 aaPredicted RBP20.2■□□□□ 0.82
UBE2D3-220ENST00000505307 TPI1P60174 286 aa20.2■□□□□ 0.82
UBE2D3-220ENST00000505307 DNAAF5Q86Y56 855 aa20.2■□□□□ 0.82
UBE2D3-220ENST00000505307 AOPEPQ8N6M6 819 aa20.2■□□□□ 0.82
UBE2D3-220ENST00000505307 NCAPGQ9BPX3 1015 aa20.2■□□□□ 0.82
UBE2D3-220ENST00000505307 SYT11Q9BT88 431 aa20.2■□□□□ 0.82
UBE2D3-220ENST00000505307 KLC2Q9H0B6 622 aa20.2■□□□□ 0.82
UBE2D3-220ENST00000505307 MYLKQ15746 1914 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 MMP20O60882 483 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 ATP1A3P13637 1013 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 TIMP2P16035 220 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 TYRO3Q06418 890 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 EIF2B5Q13144 721 aaKnown RBP20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 MAMLD1Q13495 774 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 TMEM52BQ4KMG9 183 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 FILIP1LQ4L180 1135 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 PLEKHA7Q6IQ23 1121 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 KDM7AQ6ZMT4 941 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 VPS36Q86VN1 386 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 LSMEM2Q8N112 164 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 TPCN2Q8NHX9 752 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 GLMNQ92990 594 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 GRAMD1AQ96CP6 724 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 ZNF641Q96N77 438 aaPredicted RBP20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 IL12RB2Q99665 862 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 BPIFA3Q9BQP9 254 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 LRRC19Q9H756 370 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 LHX3Q9UBR4 397 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 KLF15Q9UIH9 416 aa20.19■□□□□ 0.82
UBE2D3-220ENST00000505307 LY6G6EA0A0G2JKS1 128 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 ARHGAP42A6NI28 874 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 TMEM110-MUSTN1A8MSY1 372 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 SMTNL1A8MU46 457 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 TLX3O43711 291 aaPredicted RBP20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 BRINP1O60477 761 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 NEBLO76041 1014 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 PSMA2P25787 234 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 RPIAP49247 311 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 ZNF135P52742 658 aaPredicted RBP20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 CYTH1Q15438 398 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 SOWAHCQ53LP3 525 aaPredicted RBP20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 ERMARDQ5T6L9 678 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 BRAT1Q6PJG6 821 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 LMX1AQ8TE12 382 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 FNIP1Q8TF40 1166 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 TUBGCP5Q96RT8 1024 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 SLC13A1Q9BZW2 595 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 SUV39H2Q9H5I1 410 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 RTN4Q9NQC3 1192 aaKnown RBP20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 AP4E1Q9UPM8 1137 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 U3KQA8 63 aa20.18■□□□□ 0.82
UBE2D3-220ENST00000505307 TSPAN11A1L157 253 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 EEF2KO00418 725 aaKnown RBP20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 LZTS3O60299 673 aaPredicted RBP20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 PRAMEF11O60813 436 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 RNF8O76064 485 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 GZMAP12544 262 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 IGFALSP35858 605 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 CSNK1DP48730 415 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 PEX5P50542 639 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 BLKP51451 505 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 OGDHQ02218 1023 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 UGP2Q16851 508 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 KLHL40Q2TBA0 621 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 TBC1D25Q3MII6 688 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 TPRG1LQ5T0D9 272 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 CFAP58Q5T655 872 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 MACC1Q6ZN28 852 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 PSTKQ8IV42 348 aaKnown RBP20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 IFI44Q8TCB0 444 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 MAPK15Q8TD08 544 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 PDFQ9HBH1 243 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 TAS2R14Q9NYV8 317 aa20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 APOBEC3BQ9UH17 382 aaKnown RBP20.17■□□□□ 0.82
UBE2D3-220ENST00000505307 EME2A4GXA9 379 aaPredicted RBP20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 LMO7DNF2Z398 122 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 TEX33O43247 280 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 DAPK3O43293 454 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms