RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 CALR3Q96L12 384 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 GDAP1L1Q96MZ0 367 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ALS2CR12Q96Q35 445 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 NCAPGQ9BPX3 1015 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 CAAP1Q9H8G2 361 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 SP110Q9HB58 689 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 PDFQ9HBH1 243 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 PCDH18Q9HCL0 1135 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 PREBQ9HCU5 417 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 GDF3Q9NR23 364 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 KLHL11Q9NVR0 708 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 DONSONQ9NYP3 566 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 LHX3Q9UBR4 397 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ITM2BQ9Y287 266 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 BTBD3Q9Y2F9 522 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 FADS3Q9Y5Q0 445 aa8.39□□□□□ -1.07
HDAC6-221ENST00000477561 ASCC3Q8N3C0 2202 aaKnown RBP8.39□□□□□ -1.07
HDAC6-221ENST00000477561 CNOT1A5YKK6 2376 aaKnown RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 TTC24A2A3L6 582 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 IGLON5A6NGN9 336 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 BTNL10A8MVZ5 291 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 PRAMEF26H0Y7S4 382 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 NEMP1O14524 444 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 PALMO75781 387 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 PIGNO95427 931 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CD48P09326 243 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF883P0CG24 379 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 TIMP2P16035 220 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 PMLP29590 882 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CASQ1P31415 396 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 HCAR3P49019 387 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CCT8P50990 548 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CDH6P55285 790 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 NXPH1P58417 271 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 TAS2R40P59535 323 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 SEMG2Q02383 582 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 RAD51Q06609 339 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 BNIP3Q12983 259 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 MMRN1Q13201 1228 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 FGL2Q14314 439 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 SUZ12Q15022 739 aaKnown RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 SHBQ15464 509 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 SLC45A4Q5BKX6 768 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 AFMIDQ63HM1 303 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 NEK5Q6P3R8 708 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 SYT10Q6XYQ8 523 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 SPATS2Q86XZ4 545 aaKnown RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 NIPA2Q8N8Q9 360 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 PNPLA1Q8N8W4 532 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 MFSD2AQ8NA29 543 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 TSEN2Q8NCE0 465 aaKnown RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 TEKT4Q8WW24 435 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CASKIN2Q8WXE0 1202 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF592Q92610 1267 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 KLHDC7BQ96G42 594 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 LRIG1Q96JA1 1093 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 FEM1CQ96JP0 617 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CNTNAP3BQ96NU0 1288 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CSPG4P5Q96PW8 444 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 ELF4Q99607 663 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 SLC17A9Q9BYT1 436 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CNTNAP3Q9BZ76 1288 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 IPO11Q9UI26 975 aaKnown RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 PCOLCE2Q9UKZ9 415 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
HDAC6-221ENST00000477561 GUCA1BQ9UMX6 200 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 DMTF1Q9Y222 760 aa8.38□□□□□ -1.07
HDAC6-221ENST00000477561 CHD5Q8TDI0 1954 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 A0A0A6YYK5 440 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 A0A1B0GTQ1 180 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 MUSKO15146 869 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 RAD51BO15315 384 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 SPINT1O43278 529 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 HYAL3O43820 417 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 BUB1BO60566 1050 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 MMP20O60882 483 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 SDC3O75056 442 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 CBFA2T3O75081 653 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 PROSCO94903 275 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 PRKCGP05129 697 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 ITGAVP06756 1048 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 TMEM253P0C7T8 217 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 THEGLP0DJG4 465 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 HNRNPA2B1P22626 353 aaKnown RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 IL4RP24394 825 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 AKT2P31751 481 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 NUDT1P36639 197 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF135P52742 658 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 NAP1L1P55209 391 aaKnown RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 RPS21P63220 83 aaKnown RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 IL10RBQ08334 325 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 SLC10A7Q0GE19 358 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 MESDQ14696 234 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 HADHQ16836 314 aaKnown RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 TMEM259Q4ZIN3 620 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 CCDC157Q569K6 752 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF569Q5MCW4 686 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 ZFYVE27Q5T4F4 411 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 TMCO3Q6UWJ1 677 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms