RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	SH2D3C	Q8N5H7	860 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	NDRG1	Q92597	394 aa	Known RBP	12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	TATDN2	Q93075	761 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	SLC39A13	Q96H72	371 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	BMF	Q96LC9	184 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	C1QTNF7	Q9BXJ2	289 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	FZD3	Q9NPG1	666 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	AIPL1	Q9NZN9	384 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	VPS28	Q9UK41	221 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	HS3ST2	Q9Y278	367 aa		12.51	□□□□□ -0.41
SBF1-208	ENST00000477234	LRRC53	A6NM62	1247 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234		F8VZ95	297 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	AP1G1	O43747	822 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	BNIP3L	O60238	219 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	AGFG2	O95081	481 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	MOCS2	O96007	188 aa	Predicted RBP	12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	PAK4	O96013	591 aa	Predicted RBP	12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	CD19	P15391	556 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	SOX5	P35711	763 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	CD97	P48960	835 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	METAP1	P53582	386 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	CDK17	Q00537	523 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	DRAP1	Q14919	205 aa	Predicted RBP	12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	FHL5	Q5TD97	284 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	DPY19L2P1	Q6NXN4	242 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	TMTC1	Q8IUR5	882 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	ARHGEF19	Q8IW93	802 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	LRRC8A	Q8IWT6	810 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	TC2N	Q8N9U0	490 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	SHC3	Q92529	594 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	RAB7B	Q96AH8	199 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	NOX5	Q96PH1	765 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	CDH19	Q9H159	772 aa		12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	CUEDC1	Q9NWM3	386 aa	Predicted RBP	12.5	□□□□□ -0.41
SBF1-208	ENST00000477234	BSN	Q9UPA5	3926 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	ITPR2	Q14571	2701 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	PRAMEF33	A0A0G2JMD5	474 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	PMS2P1	A4D2B8	440 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	POM121B	A6NF01	834 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	TMEM110-MUSTN1	A8MSY1	372 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	ZNF891	A8MT65	544 aa	Predicted RBP	12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	EPHB6	O15197	1021 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	TSPAN6	O43657	245 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	PRAMEF10	O60809	474 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	SERPING1	P05155	500 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	RPLP0	P05388	317 aa	Known RBP	12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	PNLIP	P16233	465 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	JAM2	P57087	298 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	KLRB1	Q12918	225 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	ASIC2	Q16515	512 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	CLPP	Q16740	277 aa	Predicted RBP	12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	ARHGAP44	Q17R89	818 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	FAXC	Q5TGI0	409 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	LCLAT1	Q6UWP7	414 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	VASH2	Q86V25	355 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	GKN2	Q86XP6	184 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	PHACTR4	Q8IZ21	702 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	IL22RA1	Q8N6P7	574 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	ATP11C	Q8NB49	1132 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	ATL2	Q8NHH9	583 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	DQX1	Q8TE96	717 aa	Known RBP	12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	FAM149B1	Q96BN6	582 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	BAG1	Q99933	345 aa	Predicted RBP	12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	FEM1A	Q9BSK4	669 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	SLC12A9	Q9BXP2	914 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	CPEB1	Q9BZB8	566 aa	Known RBP	12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	LRRN3	Q9H3W5	708 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	GULP1	Q9UBP9	304 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	IL36A	Q9UHA7	158 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	ZFR2	Q9UPR6	939 aa	Known RBP	12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	RELN	P78509	3460 aa		12.49	□□□□□ -0.41
SBF1-208	ENST00000477234	KCNU1	A8MYU2	1149 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	TULP2	O00295	520 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	NEMP1	O14524	444 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	YY2	O15391	372 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	CLDN11	O75508	207 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	IPO7	O95373	1038 aa	Known RBP	12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	PAEP	P09466	180 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	CTSE	P14091	401 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	ITGB7	P26010	798 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	CYLC1	P35663	651 aa	Predicted RBP	12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	USP8	P40818	1118 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	ACADSB	P45954	432 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	MC1R	Q01726	317 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	PPARD	Q03181	441 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	PTK2	Q05397	1052 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	ZFP36L1	Q07352	338 aa	Known RBP	12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	KLHL30	Q0D2K2	578 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	MEA1	Q16626	185 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	TDRD12	Q587J7	1177 aa	Known RBP	12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	RAP1GAP2	Q684P5	730 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	SEL1L3	Q68CR1	1132 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	CCDC170	Q8IYT3	715 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	UBA3	Q8TBC4	463 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	SLC35F5	Q8WV83	523 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	HTR3C	Q8WXA8	447 aa		12.48	□□□□□ -0.41
SBF1-208	ENST00000477234	USP7	Q93009	1102 aa		12.48	□□□□□ -0.41

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