RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 NUP85Q9BW27 656 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 ANAPC7Q9UJX3 599 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 NENFQ9UMX5 172 aa19.15■□□□□ 0.66
COL5A1-203ENST00000460264 SHROOM3Q8TF72 1996 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 H3BRJ5 948 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 DFFAO00273 331 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 PIGNO95427 931 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 TPM3P06753 285 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 TIMP2P16035 220 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 HNRNPH3P31942 346 aaKnown RBP19.14■□□□□ 0.65
COL5A1-203ENST00000460264 SGCGQ13326 291 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 GRM3Q14832 879 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 NFKBIBQ15653 356 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 BOLA3Q53S33 107 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 ALKBH5Q6P6C2 394 aaKnown RBP19.14■□□□□ 0.65
COL5A1-203ENST00000460264 ARHGAP36Q6ZRI8 547 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 TMPRSS7Q7RTY8 843 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 ZCCHC14Q8WYQ9 949 aaKnown RBP19.14■□□□□ 0.65
COL5A1-203ENST00000460264 HSPH1Q92598 858 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 BTBD6Q96KE9 485 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 LENG8Q96PV6 779 aaPredicted RBP19.14■□□□□ 0.65
COL5A1-203ENST00000460264 ZWILCHQ9H900 591 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 SP110Q9HB58 689 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL5A1-203ENST00000460264 ZMIZ1Q9ULJ6 1067 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL5A1-203ENST00000460264 GOLGA4Q13439 2230 aaKnown RBP19.14■□□□□ 0.65
COL5A1-203ENST00000460264 FREM2Q5SZK8 3169 aa19.14■□□□□ 0.65
COL5A1-203ENST00000460264 WDFY3Q8IZQ1 3526 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 DMXL2Q8TDJ6 3036 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 TSPAN11A1L157 253 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 ARL4AP40617 200 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 RGRP47804 291 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 ACADVLP49748 655 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 SLC25A11Q02978 314 aaKnown RBP19.13■□□□□ 0.65
COL5A1-203ENST00000460264 DNAJC3Q13217 504 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 CCDC122Q5T0U0 273 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 TXNRD3NBQ6F5E7 133 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 POLNQ7Z5Q5 900 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 DCP2Q8IU60 420 aaKnown RBP19.13■□□□□ 0.65
COL5A1-203ENST00000460264 TP53INP2Q8IXH6 220 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 SLC25A45Q8N413 288 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 DENND6BQ8NEG7 585 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 TEKT4Q8WW24 435 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 TSC1Q92574 1164 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 IFT43Q96FT9 208 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 CAAP1Q9H8G2 361 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 IP6K2Q9UHH9 426 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 PCDHGA1Q9Y5H4 931 aa19.13■□□□□ 0.65
COL5A1-203ENST00000460264 FPGTO14772 594 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 PALMO75781 387 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 PIAS2O75928 621 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 RARAP10276 462 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 ITIH2P19823 946 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 DGKAP23743 735 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 RABIFP47224 123 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 SUOXP51687 545 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 IL10RBQ08334 325 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 FZD2Q14332 565 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 SMAD1Q15797 465 aaKnown RBP19.12■□□□□ 0.65
COL5A1-203ENST00000460264 DHRS13Q6UX07 377 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 KDM7AQ6ZMT4 941 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 GALNT15Q8N3T1 639 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 LZTR1Q8N653 840 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 TSEN2Q8NCE0 465 aaKnown RBP19.12■□□□□ 0.65
COL5A1-203ENST00000460264 HCAR2Q8TDS4 363 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 CSPG4P5Q96PW8 444 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 TUBGCP5Q96RT8 1024 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 SUV39H2Q9H5I1 410 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 UCKL1Q9NWZ5 548 aa19.12■□□□□ 0.65
COL5A1-203ENST00000460264 IPO11Q9UI26 975 aaKnown RBP19.12■□□□□ 0.65
COL5A1-203ENST00000460264 ANKRD11Q6UB99 2663 aaPredicted RBP19.12■□□□□ 0.65
COL5A1-203ENST00000460264 SPTY2D1-AS1A0A0U1RR47 76 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 TRIM38O00635 465 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 BUB1BO60566 1050 aaPredicted RBP19.11■□□□□ 0.65
COL5A1-203ENST00000460264 MMP20O60882 483 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 RFPL3O75679 317 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 XPAP23025 273 aaPredicted RBP19.11■□□□□ 0.65
COL5A1-203ENST00000460264 AMPD1P23109 780 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 EIF4A3P38919 411 aaKnown RBP19.11■□□□□ 0.65
COL5A1-203ENST00000460264 CSNK1DP48730 415 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 PFN3P60673 137 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 RFTN1Q14699 578 aaPredicted RBP19.11■□□□□ 0.65
COL5A1-203ENST00000460264 PROX2Q3B8N5 592 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 SPECC1LQ69YQ0 1117 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 SRLQ86TD4 932 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 CXorf40AQ8TE69 158 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 CENPTQ96BT3 561 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 ZNF641Q96N77 438 aaPredicted RBP19.11■□□□□ 0.65
COL5A1-203ENST00000460264 WRAP53Q9BUR4 548 aaKnown RBP19.11■□□□□ 0.65
COL5A1-203ENST00000460264 CINPQ9BW66 212 aaPredicted RBP19.11■□□□□ 0.65
COL5A1-203ENST00000460264 PCDH18Q9HCL0 1135 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 ETNK2Q9NVF9 386 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 DNAJC28Q9NX36 388 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 PKD1L2Q7Z442 2459 aa19.11■□□□□ 0.65
COL5A1-203ENST00000460264 CHD6Q8TD26 2715 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 MYLKQ15746 1914 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 MYO1FO00160 1098 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 MUSKO15146 869 aa19.1■□□□□ 0.65
COL5A1-203ENST00000460264 CBFA2T2O43439 604 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms