RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 MANEAQ5SRI9 462 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 MACC1Q6ZN28 852 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 ARL10Q8N8L6 244 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 Q8N9G6 341 aaPredicted RBP18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 ZSCAN1Q8NBB4 408 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 KYQ8NBH2 561 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 TMEM35BQ8NCS4 154 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 PCDH19Q8TAB3 1148 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 TSACCQ96A04 125 aaPredicted RBP18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 C18orf8Q96DM3 657 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 HAPLN3Q96S86 360 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 EPAS1Q99814 870 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 WRAP53Q9BUR4 548 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 DNAI1Q9UI46 699 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 RABGEF1Q9UJ41 708 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 GPR34Q9UPC5 381 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 PCDHGA7Q9Y5G6 932 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 RP1P56715 2156 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 CD160O95971 181 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 FAM87AP0C7U9 286 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 ITIH2P19823 946 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 XPAP23025 273 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 CLCN1P35523 988 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 ETFBP38117 255 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 GEMIN4P57678 1058 aaKnown RBP18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 MORC3Q14149 939 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 MYLK3Q32MK0 819 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 C2CD6Q53TS8 623 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 FOXR2Q6PJQ5 311 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 ENPP7Q6UWV6 458 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 XKR5Q6UX68 686 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 GDPD4Q6W3E5 623 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 GKN2Q86XP6 184 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 FSTL5Q8N475 847 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 OR2AP1Q8NGE2 309 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 NT5C3BQ969T7 300 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 ISG20Q96AZ6 181 aaKnown RBP18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 TBATAQ96M53 351 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 CFAP57Q96MR6 1250 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 TMEM74Q96NL1 305 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 OSBPL1AQ9BXW6 950 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 DNAJC12Q9UKB3 198 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 PCDHB11Q9Y5F2 797 aa18.26■□□□□ 0.51
CHCHD3-203ENST00000448878 D6RAR5 112 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 FOXN3O00409 490 aaPredicted RBP18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 NOBOXO60393 691 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 LIPCP11150 499 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 PON1P27169 355 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 FLT3P36888 993 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 HK3P52790 923 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 MAPK10P53779 464 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 ATP11AP98196 1134 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 RAD51Q06609 339 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 ATXN7L2Q5T6C5 722 aaPredicted RBP18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 VASH2Q86V25 355 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 PLPP6Q8IY26 295 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 EDEM3Q9BZQ6 932 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 LRRN3Q9H3W5 708 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 TMEM51Q9NW97 253 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 AJAP1Q9UKB5 411 aaPredicted RBP18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 COQ6Q9Y2Z9 468 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 LOXL2Q9Y4K0 774 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 PIEZO2Q9H5I5 2752 aa18.25■□□□□ 0.51
CHCHD3-203ENST00000448878 TOR1BO14657 336 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 RASGRP1O95267 797 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 GSRP00390 522 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 ITGB2P05107 769 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 SFTPCP11686 197 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 ITIH1P19827 911 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 HTR1BP28222 390 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 BPIFB4P59827 614 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 IRF4Q15306 451 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 CDO1Q16878 200 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 TAF3Q5VWG9 929 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 XYLT1Q86Y38 959 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 TP53I13Q8NBR0 393 aaPredicted RBP18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 ARHGEF2Q92974 986 aaKnown RBP18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 STARD5Q9NSY2 213 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 NDFIP2Q9NV92 336 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 PPARGC1AQ9UBK2 798 aaKnown RBP18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 ZNF212Q9UDV6 495 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 OR12D3Q9UGF7 316 aa18.24■□□□□ 0.51
CHCHD3-203ENST00000448878 A0A1W2PQM1 296 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 AREL1O15033 823 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 BUB1O43683 1085 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 MTIF2P46199 727 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 CYP4F2P78329 520 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 LRRC14Q15048 493 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 COLEC12Q5KU26 742 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 LVRNQ6Q4G3 990 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 ZFAND4Q86XD8 727 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 NETO2Q8NC67 525 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 OR6C4Q8NGE1 309 aa18.23■□□□□ 0.51
CHCHD3-203ENST00000448878 PRAMEF33A0A0G2JMD5 474 aa18.22■□□□□ 0.51
CHCHD3-203ENST00000448878 TMEM110-MUSTN1A8MSY1 372 aa18.22■□□□□ 0.51
CHCHD3-203ENST00000448878 TERTO14746 1132 aaKnown RBP18.22■□□□□ 0.51
CHCHD3-203ENST00000448878 NVLO15381 856 aaKnown RBP18.22■□□□□ 0.51
CHCHD3-203ENST00000448878 SUV39H1O43463 412 aa18.22■□□□□ 0.51
CHCHD3-203ENST00000448878 PRAMEF10O60809 474 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms