RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FAM189BP81408 668 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 PSG6Q00889 435 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 FOXL1Q12952 345 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 PTK6Q13882 451 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 SSPNQ14714 243 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 ZNF618Q5T7W0 954 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 GALNT17Q6IS24 598 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 GPAT4Q86UL3 456 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 NLRP14Q86W24 1093 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 TUSC5Q8IXB3 177 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 UTP15Q8TED0 518 aaKnown RBP5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 AKAP1Q92667 903 aaKnown RBP eCLIP5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 MIEF2Q96C03 454 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 ERO1AQ96HE7 468 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 HS6ST2Q96MM7 605 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 GAD1Q99259 594 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 KIF9Q9HAQ2 790 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 RANGRFQ9HD47 186 aaPredicted RBP5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 TXNRD2Q9NNW7 524 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 NLKQ9UBE8 527 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 FZD4Q9ULV1 537 aa5.44□□□□□ -1.54
TM9SF3-202ENST00000443638 LNP1A1A4G5 178 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 A6NL46 340 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 ENO4A6NNW6 628 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 AHRRA9YTQ3 701 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 NPIPB11E5RHQ5 1161 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 PLOD2O00469 737 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 SUV39H1O43463 412 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 DIAPH2O60879 1101 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 SLC25A12O75746 678 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 ONECUT2O95948 504 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 PNPP00491 289 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 TFP02787 698 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 RHOP08100 348 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 RFPL3SP0C7P2 107 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 IRF1P10914 325 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 TMEM11P17152 192 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 GAP43P17677 238 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 ERCC2P18074 760 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 KRT4P19013 534 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 MTHFRP42898 656 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 EPHB4P54760 987 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 SLC12A3P55017 1021 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 ZBTB16Q05516 673 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 ITIH3Q06033 890 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 CAPSQ13938 189 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 SHBQ15464 509 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 ZSCAN23Q3MJ62 389 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 ARMC4Q5T2S8 1044 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 TEDDM1Q5T9Z0 273 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 IL20RBQ6UXL0 311 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 MSANTD1Q6ZTZ1 278 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 GSTA5Q7RTV2 222 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 CAMKMTQ7Z624 323 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 DHX40Q8IX18 779 aaKnown RBP5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 SIX6OS1Q8N1H7 587 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 GHDCQ8N2G8 530 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 GUF1Q8N442 669 aaKnown RBP5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 LINC01465Q8N7H1 131 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 C12orf76Q8N812 135 aaPredicted RBP5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 SPATA20Q8TB22 786 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 LPIN2Q92539 896 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 FKBP10Q96AY3 582 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 HDAC11Q96DB2 347 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 PPP1R13BQ96KQ4 1090 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 GPR78Q96P69 363 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 LRRC37BQ96QE4 947 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 MNTQ99583 582 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 MGME1Q9BQP7 344 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 NUP85Q9BW27 656 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 C1QTNF1Q9BXJ1 281 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 CADM1Q9BY67 442 aaKnown RBP5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 WDR11Q9BZH6 1224 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 USP29Q9HBJ7 922 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 IL1RAPL2Q9NP60 686 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 CMAHPQ9Y471 501 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 NFS1Q9Y697 457 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 SLC30A1Q9Y6M5 507 aa5.43□□□□□ -1.54
TM9SF3-202ENST00000443638 FAM237AA0A1B0GTK4 181 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 WDR27A2RRH5 827 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TCAF2A6NFQ2 919 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 PLRG1O43660 514 aaKnown RBP5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 STRNO43815 780 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 LPXNO60711 386 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 RAD17O75943 681 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 KRT10P13645 584 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 MMP9P14780 707 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 PTPN3P26045 913 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 PCSK6P29122 969 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 CASP3P42574 277 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 RAB28P51157 221 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 ZNF84P51523 738 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 GALCP54803 685 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 MRPS35P82673 323 aaKnown RBP5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 DMWDQ09019 674 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 RPA4Q13156 261 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TNIP1Q15025 636 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 HIST2H2ACQ16777 129 aaPredicted RBP5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 COL28A1Q2UY09 1125 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 LEXMQ3ZCV2 418 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms