RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 SYCE3A1L190 88 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 K7ESM1 405 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 AREL1O15033 823 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 SCAMP1O15126 338 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 SPINT1O43278 529 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 PALMO75781 387 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 CSF2P04141 144 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 JUNDP17535 347 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 ERCC2P18074 760 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 MIPP30301 263 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 PRKCIP41743 596 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 PFN3P60673 137 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 INSM1Q01101 510 aaPredicted RBP13.47□□□□□ -0.25
EDEM1-202ENST00000434243 SEMG2Q02383 582 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 ELP6Q0PNE2 266 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 PTK2BQ14289 1009 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 NR1I3Q14994 352 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 IQCB1Q15051 598 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 KLHL40Q2TBA0 621 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 COL28A1Q2UY09 1125 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
EDEM1-202ENST00000434243 RFX8Q6ZV50 586 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 ZNF548Q8NEK5 533 aaPredicted RBP13.47□□□□□ -0.25
EDEM1-202ENST00000434243 CENPTQ96BT3 561 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 TRIM11Q96F44 468 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 APOLD1Q96LR9 279 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 DUSP23Q9BVJ7 150 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
EDEM1-202ENST00000434243 CPEB1Q9BZB8 566 aaKnown RBP13.47□□□□□ -0.25
EDEM1-202ENST00000434243 ABCG4Q9H172 646 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 LRRC19Q9H756 370 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 MRPL47Q9HD33 250 aaKnown RBP13.47□□□□□ -0.25
EDEM1-202ENST00000434243 DKK3Q9UBP4 350 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 DKK4Q9UBT3 224 aa13.47□□□□□ -0.25
EDEM1-202ENST00000434243 KMT2BQ9UMN6 2715 aaPredicted RBP13.46□□□□□ -0.25
EDEM1-202ENST00000434243 CABIN1Q9Y6J0 2220 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.25
EDEM1-202ENST00000434243 PRAMEF11O60813 436 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 MT-CO3P00414 261 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 GIMD1P0DJR0 217 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 MYBL1P10243 752 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 CKMT1AP12532 417 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 NME1P15531 152 aaKnown RBP13.46□□□□□ -0.25
EDEM1-202ENST00000434243 IGFALSP35858 605 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 DUSP3P51452 185 aaPredicted RBP13.46□□□□□ -0.25
EDEM1-202ENST00000434243 GRM3Q14832 879 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 DEFB133Q30KQ1 61 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 TPRG1LQ5T0D9 272 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 FAXCQ5TGI0 409 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 ERAP2Q6P179 960 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 LUZP1Q86V48 1076 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 CAMK1DQ8IU85 385 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 FNIP1Q8TF40 1166 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 CPLX3Q8WVH0 158 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 VOPP1Q96AW1 172 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.25
EDEM1-202ENST00000434243 IL12RB2Q99665 862 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 ZWILCHQ9H900 591 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 PDFQ9HBH1 243 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 MBNL1Q9NR56 388 aaKnown RBP13.46□□□□□ -0.25
EDEM1-202ENST00000434243 GPR27Q9NS67 375 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 SPASTQ9UBP0 616 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 KLF15Q9UIH9 416 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 COQ6Q9Y2Z9 468 aa13.46□□□□□ -0.25
EDEM1-202ENST00000434243 COL5A1P20908 1838 aaPredicted RBP13.46□□□□□ -0.26
EDEM1-202ENST00000434243 CPED1A4D0V7 1026 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 GOLGA6L19H0YKK7 550 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 AQP9O43315 295 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 LZTS3O60299 673 aaPredicted RBP13.45□□□□□ -0.26
EDEM1-202ENST00000434243 PRKCGP05129 697 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 EIF4A3P38919 411 aaKnown RBP13.45□□□□□ -0.26
EDEM1-202ENST00000434243 SUOXP51687 545 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 UBASH3AP57075 661 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 FANCCQ00597 558 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 EIF2B5Q13144 721 aaKnown RBP13.45□□□□□ -0.26
EDEM1-202ENST00000434243 C1orf61Q13536 156 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 LRRC14Q15048 493 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 NFKBIBQ15653 356 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 UGP2Q16851 508 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 SMTNL2Q2TAL5 461 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 TMEM52BQ4KMG9 183 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 ARHGAP36Q6ZRI8 547 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 SRLQ86TD4 932 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 RBFAQ8N0V3 343 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 TSEN2Q8NCE0 465 aaKnown RBP13.45□□□□□ -0.26
EDEM1-202ENST00000434243 BTN2A2Q8WVV5 523 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 HSPH1Q92598 858 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 ZNF641Q96N77 438 aaPredicted RBP13.45□□□□□ -0.26
EDEM1-202ENST00000434243 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 SLC13A1Q9BZW2 595 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 NRSN2Q9GZP1 204 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 PCDH12Q9NPG4 1184 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 APOBEC3BQ9UH17 382 aaKnown RBP13.45□□□□□ -0.26
EDEM1-202ENST00000434243 DOCK4Q8N1I0 1966 aa13.45□□□□□ -0.26
EDEM1-202ENST00000434243 PLXNB3Q9ULL4 1909 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms