RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 MSLNQ13421 630 aaPredicted RBP15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 PEX6Q13608 980 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 KPNB1Q14974 876 aaKnown RBP15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 CNSTQ6PJW8 725 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 LDB1Q86U70 411 aaPredicted RBP15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 OR52K2Q8NGK3 314 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 PXYLP1Q8TE99 480 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 NUDCD1Q96RS6 583 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 RNPEPL1Q9HAU8 725 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 KCTD3Q9Y597 815 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 PCDHB12Q9Y5F1 795 aa15.34■□□□□ 0.05
SCAMP4-202ENST00000409472 OR6C75A6NL08 312 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 TBKBP1A7MCY6 615 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 TBC1D4O60343 1298 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 TLR5O60602 858 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 IGLV3-27P01718 113 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 GALTP07902 379 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 ACADSP16219 412 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 GRK2P25098 689 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 TAS2R39P59534 338 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 CDK18Q07002 472 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 GPR17Q13304 367 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 SLC9B1Q4ZJI4 515 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 CRIPAKQ8N1N5 446 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 SH3RF2Q8TEC5 729 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 BTN2A3PQ96KV6 586 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 ATP13A1Q9HD20 1204 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 OR51F1A6NGY5 319 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 HNRNPCL1O60812 293 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 SIN3BO75182 1162 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 SLC6A4P31645 630 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 ARSDP51689 593 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 NDST2P52849 883 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 HNRNPDQ14103 355 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 PTPRCAPQ14761 206 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 DEFB115Q30KQ5 88 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 ACSBG2Q5FVE4 666 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 MARC1Q5VT66 337 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 TMEM154Q6P9G4 183 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 POTEHQ6S545 545 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 FSTL5Q8N475 847 aaPredicted RBP15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 OR13J1Q8NGT2 312 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 ARRDC2Q8TBH0 407 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 PPP4R1Q8TF05 950 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 MCUR1Q96AQ8 359 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 NXNL1Q96CM4 212 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 GPR78Q96P69 363 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 OMDQ99983 421 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 VN1R3Q9BXE9 311 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 PIDD1Q9HB75 910 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 TLR8Q9NR97 1041 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 OXSMQ9NWU1 459 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 CLIC5Q9NZA1 410 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 XPR1Q9UBH6 696 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 PHF24Q9UPV7 400 aa15.33■□□□□ 0.04
SCAMP4-202ENST00000409472 A0A0D9SEW6 157 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 BUD23O43709 281 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 PQBP1O60828 265 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 HSPA4LO95757 839 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 ALDH2P05091 517 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 TPBGLP0DKB5 382 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 SLC2A3P11169 496 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 ALOX15P16050 662 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 HOXD10P28358 340 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 CDK7P50613 346 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 CCL23P55773 120 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 POLE2P56282 527 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 TSTD2Q5T7W7 516 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 ARHGAP18Q8N392 663 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 PHTF2Q8N3S3 785 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 ATP6V0D2Q8N8Y2 350 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 SGF29Q96ES7 293 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 ELMO2Q96JJ3 720 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 OLFM1Q99784 485 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 COG4Q9H9E3 785 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 UXTQ9UBK9 157 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 TAGLN3Q9UI15 199 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 BLOC1S6Q9UL45 172 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 PLA2G4CQ9UP65 541 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 KRT36O76013 467 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 GJB5O95377 273 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 JUNP05412 331 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 GNAZP19086 355 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 SP100P23497 879 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 TPP2P29144 1249 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 SFSWAPQ12872 951 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 SNX30Q5VWJ9 437 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 KIAA0930Q6ICG6 404 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 C2CD4AQ8NCU7 369 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 SCYL1Q96KG9 808 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 TLK1Q9UKI8 766 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 FBXO5Q9UKT4 447 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 LRFN2Q9ULH4 789 aa15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 RUVBL2Q9Y230 463 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-202ENST00000409472 GOLGA8QA0A0J9YX86 632 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 GOLGA8OA6NCC3 632 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 NEMP2A6NFY4 417 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 EIF4E1BA6NMX2 242 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 TARM1B6A8C7 271 aa15.31■□□□□ 0.04
SCAMP4-202ENST00000409472 E9PBE3 544 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms