RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 KCTD3Q9Y597 815 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 CDY1Q9Y6F8 540 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 TCAF2A6NFQ2 919 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 SDHDO14521 159 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 PMPCBO75439 489 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 PIK3R1P27986 724 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 DSC2Q02487 901 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 SULT2A1Q06520 285 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 ZNF423Q2M1K9 1284 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 SFT2D3Q587I9 215 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 LZTR1Q8N653 840 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 SLC25A51Q9H1U9 297 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 MED16Q9Y2X0 877 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-202ENST00000394888 ACTL7AQ9Y615 435 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 CCL22O00626 93 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 RPL14P50914 215 aaKnown RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 PIGGQ5H8A4 983 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 KDELC2Q7Z4H8 507 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 GALNT7Q86SF2 657 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 CIR1Q86X95 450 aaPredicted RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 FBXW8Q8N3Y1 598 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 SLC43A3Q8NBI5 491 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 ENTPD7Q9NQZ7 604 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 TBC1D13Q9NVG8 400 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 IPO11Q9UI26 975 aaKnown RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 MICAL3Q7RTP6 2002 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 CASQ2O14958 399 aaPredicted RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 HDAC3O15379 428 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 H2AFYO75367 372 aaKnown RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 GRIK1P39086 918 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 DNAJB13P59910 316 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 PTK2BQ14289 1009 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 USP10Q14694 798 aaKnown RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 TMC7Q7Z402 723 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 DEFB107AQ8IZN7 70 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 PPP1R14CQ8TAE6 165 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 PSMG2Q969U7 264 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 NDNQ99608 321 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 ZNF184Q99676 751 aaPredicted RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 TCF7L2Q9NQB0 619 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 RNF186Q9NXI6 227 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 TXNDC16Q9P2K2 825 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 LRCH1Q9Y2L9 728 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 LOC100653049A0A140TA62 436 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 KRT34O76011 436 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 ANXA9O76027 345 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 PDHA1P08559 390 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 POLD2P49005 469 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 ZNF470Q6ECI4 717 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 C8orf82Q6P1X6 216 aaPredicted RBP15.53■□□□□ 0.08
CPSF7-202ENST00000394888 PDSS2Q86YH6 399 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 MARK4Q96L34 752 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 NUF2Q9BZD4 464 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 ZFYVE28Q9HCC9 887 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 CLIC5Q9NZA1 410 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 SQORQ9Y6N5 450 aa15.53■□□□□ 0.08
CPSF7-202ENST00000394888 PLXNB3Q9ULL4 1909 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 PSMD3O43242 534 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 ZDHHC11BP0C7U3 371 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 ELNP15502 786 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 COG7P83436 770 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 PSMD5Q16401 504 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 SIRPB2Q5JXA9 342 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 FBXL22Q6P050 247 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 TFAP2DQ7Z6R9 452 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 METTL23Q86XA0 190 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 CILP2Q8IUL8 1156 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 SPATA2LQ8IUW3 424 aaPredicted RBP15.52■□□□□ 0.08
CPSF7-202ENST00000394888 BCL7CQ8WUZ0 217 aaPredicted RBP15.52■□□□□ 0.08
CPSF7-202ENST00000394888 PPP1R36Q96LQ0 422 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 TRIB3Q96RU7 358 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 ZBTB26Q9HCK0 441 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 FNIP2Q9P278 1114 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 PACSIN3Q9UKS6 424 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 SSX2IPQ9Y2D8 614 aa15.52■□□□□ 0.08
CPSF7-202ENST00000394888 COPG1Q9Y678 874 aaKnown RBP15.52■□□□□ 0.08
CPSF7-202ENST00000394888 CCDC189A1A4V9 331 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 H3BNC9 293 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 HSPA4LO95757 839 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 S1PR4O95977 384 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 MOCS2O96007 188 aaPredicted RBP15.52■□□□□ 0.07
CPSF7-202ENST00000394888 NDST2P52849 883 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 MS4A2Q01362 244 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 MAPRE1Q15691 268 aaKnown RBP15.52■□□□□ 0.07
CPSF7-202ENST00000394888 AAGABQ6PD74 315 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 TICAM1Q8IUC6 712 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 GPR62Q9BZJ7 368 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 CATSPERBQ9H7T0 1116 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.52■□□□□ 0.07
CPSF7-202ENST00000394888 VPS28Q9UK41 221 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 FBXO5Q9UKT4 447 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 REV3LO60673 3130 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 OR51F1A6NGY5 319 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 CA12O43570 354 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 GEMP55040 296 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 CEACAM7Q14002 265 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 PTPRCAPQ14761 206 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 TCHHL1Q5QJ38 904 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms