RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GORASP1Q9BQQ3 440 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 RAD21L1Q9H4I0 556 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 ATP13A1Q9HD20 1204 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 HPS4Q9NQG7 708 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.05
VPS36-201ENST00000378060 LNPEPQ9UIQ6 1025 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 PCDHGC3Q9UN70 934 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 STXBP5LQ9Y2K9 1186 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 COQ4Q9Y3A0 265 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 GRIN2DO15399 1336 aa8.46□□□□□ -1.05
VPS36-201ENST00000378060 BBIP1A8MTZ0 92 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 ZMPSTE24O75844 475 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 LGALS2P05162 132 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 C2P06681 752 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 MBL2P11226 248 aaPredicted RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 FGFR1P11362 822 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 YWHAQP27348 245 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 PRDX6P30041 224 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 ZNF157P51786 506 aaPredicted RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 SLC18A1P54219 525 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 ZC3H12AQ5D1E8 599 aaKnown RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 STXBP5Q5T5C0 1151 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 IQSEC1Q6DN90 963 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 LCLAT1Q6UWP7 414 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 SLC41A1Q8IVJ1 513 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 LEMD2Q8NC56 503 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 OR7A2PQ8NGA2 310 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 JOSD2Q8TAC2 188 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 FAM81AQ8TBF8 368 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 KCTD4Q8WVF5 259 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 DNAJB3Q8WWF6 145 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 LENG1Q96BZ8 264 aaPredicted RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 PPP3R2Q96LZ3 170 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 P2RX7Q99572 595 aaKnown RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 NDNQ99608 321 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 MECRQ9BV79 373 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 NDEL1Q9GZM8 345 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 REEP1Q9H902 201 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 MAN1C1Q9NR34 630 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 XPR1Q9UBH6 696 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 NOCTQ9UK39 431 aaKnown RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 TIMM13Q9Y5L4 95 aaPredicted RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 CASTOR2A6NHX0 329 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 H3BNX3 289 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 LRCH4O75427 683 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 PIAS1O75925 651 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 KCNH1O95259 989 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 C4BPAP04003 597 aaKnown RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 USP17L7P0C7H9 530 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 ABCG1P45844 678 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 ATP6V0D1P61421 351 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 IL27RAQ6UWB1 636 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 CATSPERGQ6ZRH7 1159 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 CYP4Z2PQ8N1L4 340 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 MRPL48Q96GC5 212 aaKnown RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 FAM126AQ9BYI3 521 aaPredicted RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 ZDHHC18Q9NUE0 388 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 ARHGAP28Q9P2N2 729 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 UBA2Q9UBT2 640 aaPredicted RBP8.46□□□□□ -1.06
VPS36-201ENST00000378060 PLA2G4CQ9UP65 541 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 CRYL1Q9Y2S2 319 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 SQORQ9Y6N5 450 aa8.46□□□□□ -1.06
VPS36-201ENST00000378060 PARP14Q460N5 1801 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 GOT1P17174 413 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TNFSF9P41273 254 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TAF5Q15542 800 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 RSBN1Q5VWQ0 802 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 ARHGAP17Q68EM7 881 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 PCSK9Q8NBP7 692 aaKnown RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 S100ZQ8WXG8 99 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 P2RY11Q96G91 374 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 FAXDC2Q96IV6 333 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TEKT5Q96M29 485 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 LGMNQ99538 433 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 OSBPL6Q9BZF3 934 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TIMMDC1Q9NPL8 285 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 CNGB3Q9NQW8 809 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 PNPOQ9NVS9 261 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 DNAJC28Q9NX36 388 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 SLC12A4Q9UP95 1085 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 NR2E1Q9Y466 385 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 PTCH2Q9Y6C5 1203 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 NRP2O60462 931 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 CKMP06732 381 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 LYNP07948 512 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ATXN8OSP0DMR3 200 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 PABPC1P11940 636 aaKnown RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 IDO1P14902 403 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 DGKAP23743 735 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ITGADQ13349 1161 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ARHGAP15Q53QZ3 475 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 NOL9Q5SY16 702 aaKnown RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 INTS11Q5TA45 600 aaKnown RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 TXNDC11Q6PKC3 985 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TMC5Q6UXY8 1006 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 SLC44A2Q8IWA5 706 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 TBC1D21Q8IYX1 336 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 CARNMT1Q8N4J0 409 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms