RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 CSNK1DP48730 415 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 CDK18Q07002 472 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 RALGPS1Q5JS13 557 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 HP1BP3Q5SSJ5 553 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 FNBP1LQ5T0N5 605 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 RANBP10Q6VN20 620 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 ZNF534Q76KX8 674 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 ERLEC1Q96DZ1 483 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 IFT43Q96FT9 208 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 TBL1YQ9BQ87 522 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 NDRG2Q9UN36 371 aaKnown RBP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 CHKBQ9Y259 395 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 COL4A2P08572 1712 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 CCDC151A5D8V7 595 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 BANF1O75531 89 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 PIGNO95427 931 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 EPHX1P07099 455 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 HNRNPLP14866 589 aaKnown RBP eCLIP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 PRKCHP24723 683 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 ADRA1AP35348 466 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 MAPK8P45983 427 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 ARL4CP56559 192 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 SESN2P58004 480 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 RAD51Q06609 339 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 BCL2L1Q07817 233 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 BRD3Q15059 726 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 MSS51Q4VC12 460 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 LINC00523Q86TU6 105 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 SLC25A41Q8N5S1 370 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 PAF1Q8N7H5 531 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 GRIN3AQ8TCU5 1115 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 MSANTD3Q96H12 275 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 ATP13A3Q9H7F0 1226 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 XAB2Q9HCS7 855 aaKnown RBP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 ARHGEF3Q9NR81 526 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 FBXL21Q9UKT6 434 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 STON1Q9Y6Q2 735 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 PDHA1P08559 390 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 TRAF2Q12933 501 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 BBS9Q3SYG4 887 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 LRRC8BQ6P9F7 803 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 ZNF852Q6ZMS4 543 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 PLPP6Q8IY26 295 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 HEPHQ9BQS7 1158 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 TDRD1Q9BXT4 1180 aaKnown RBP11.05□□□□□ -0.64
BRCC3-204ENST00000369462 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 EDDM13A0A1B0GTR0 161 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-204ENST00000369462 LOC285095A0A1B0GVY8 99 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 MAN2B1O00754 1011 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 SIN3BO75182 1162 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 ERLIN1O75477 346 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 TPH1P17752 444 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 DHX9Q08211 1270 aaKnown RBP11.05□□□□□ -0.64
BRCC3-204ENST00000369462 CDH17Q12864 832 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 PDIA2Q13087 525 aaKnown RBP11.05□□□□□ -0.64
BRCC3-204ENST00000369462 SLC1A5Q15758 541 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 C9orf64Q5T6V5 341 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 DENND2CQ68D51 928 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 DENND5AQ6IQ26 1287 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 CENPUQ71F23 418 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 GJD3Q8N144 294 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 AENQ8WTP8 325 aaKnown RBP11.05□□□□□ -0.64
BRCC3-204ENST00000369462 VOPP1Q96AW1 172 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 FEM1CQ96JP0 617 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 FRMD8Q9BZ67 464 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-204ENST00000369462 FOXP3Q9BZS1 431 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 CD320Q9NPF0 282 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 WNT16Q9UBV4 365 aa11.05□□□□□ -0.64
BRCC3-204ENST00000369462 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-204ENST00000369462 PRLP01236 227 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 EPOP01588 193 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 UGT2B4P06133 528 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 MLNP12872 115 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SERPINA4P29622 427 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CRADDP78560 199 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CCINQ13939 588 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 GALNT3Q14435 633 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 FASTKD3Q14CZ7 662 aaKnown RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SLC14A2Q15849 920 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 MAP9Q49MG5 647 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 EMBQ6PCB8 327 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 STK40Q8N2I9 435 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 RMDN1Q96DB5 314 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CPEB1Q9BZB8 566 aaKnown RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SAYSD1Q9NPB0 183 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CASS4Q9NQ75 786 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 KRBA1A5PL33 1030 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 NPC1O15118 1278 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 RNF40O75150 1001 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 LEFTY1O75610 366 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 NDST3O95803 873 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CA4P22748 312 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 NTSR1P30989 418 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 MAGEA3P43357 314 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ENPP2Q13822 863 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 E2F5Q15329 346 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms