RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SCAMP1O15126 338 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 PRPSAP2O60256 369 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 GIMD1P0DJR0 217 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 JUPP14923 745 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 NME1P15531 152 aaKnown RBP17.96■□□□□ 0.47
HDDC3-201ENST00000330334 TIMP2P16035 220 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 MIPP30301 263 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 PCK1P35558 622 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 PBX1P40424 430 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 CSNK1DP48730 415 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 TPM4P67936 248 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 CA9Q16790 459 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 RFX8Q6ZV50 586 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 CYP4V2Q6ZWL3 525 aaPredicted RBP17.96■□□□□ 0.47
HDDC3-201ENST00000330334 PTAR1Q7Z6K3 402 aaPredicted RBP17.96■□□□□ 0.47
HDDC3-201ENST00000330334 FAM181AQ8N9Y4 354 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 IQCDQ96DY2 449 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 ZNF641Q96N77 438 aaPredicted RBP17.96■□□□□ 0.47
HDDC3-201ENST00000330334 PEBP4Q96S96 227 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 SNRNP25Q9BV90 132 aaKnown RBP17.96■□□□□ 0.47
HDDC3-201ENST00000330334 DUSP23Q9BVJ7 150 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 C1QTNF7Q9BXJ2 289 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 DHX35Q9H5Z1 703 aaKnown RBP17.96■□□□□ 0.47
HDDC3-201ENST00000330334 USP29Q9HBJ7 922 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 UCKL1Q9NWZ5 548 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 NLGN3Q9NZ94 848 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 CSNK1G3Q9Y6M4 447 aa17.96■□□□□ 0.47
HDDC3-201ENST00000330334 TSPAN11A1L157 253 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 ATMINO43313 823 aaPredicted RBP17.95■□□□□ 0.46
HDDC3-201ENST00000330334 LRCH4O75427 683 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 ALPPL2P10696 532 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 CKMT1AP12532 417 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 PAPOLAP51003 745 aaKnown RBP17.95■□□□□ 0.46
HDDC3-201ENST00000330334 YPEL5P62699 121 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 NSUN2Q08J23 767 aaKnown RBP eCLIP17.95■□□□□ 0.46
HDDC3-201ENST00000330334 PARGQ86W56 976 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 MARCH9Q86YJ5 346 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 MDM1Q8TC05 714 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 TUBGCP5Q96RT8 1024 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 TRIM7Q9C029 511 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 SLC39A8Q9C0K1 460 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 SUV39H2Q9H5I1 410 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 CBX8Q9HC52 389 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 GPATCH2LQ9NWQ4 482 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 DNAJC28Q9NX36 388 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 PCSK1NQ9UHG2 260 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 GGT7Q9UJ14 662 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 ITM2BQ9Y287 266 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 CELSR3Q9NYQ7 3312 aa17.95■□□□□ 0.46
HDDC3-201ENST00000330334 J3KR12 359 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 DAPK3O43293 454 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 TM7SF2O76062 418 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 SKILP12757 684 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 ERCC2P18074 760 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 FANCCQ00597 558 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 ELP6Q0PNE2 266 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 PTK2BQ14289 1009 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 RFTN1Q14699 578 aaPredicted RBP17.94■□□□□ 0.46
HDDC3-201ENST00000330334 UGP2Q16851 508 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 TMEM52BQ4KMG9 183 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 BOLA3Q53S33 107 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 HGSNATQ68CP4 663 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 BRAT1Q6PJG6 821 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 CXorf40AQ8TE69 158 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 ZNF653Q96CK0 615 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 TBATAQ96M53 351 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 KCTD15Q96SI1 283 aaPredicted RBP17.94■□□□□ 0.46
HDDC3-201ENST00000330334 IPO11Q9UI26 975 aaKnown RBP17.94■□□□□ 0.46
HDDC3-201ENST00000330334 GPSM3Q9Y4H4 160 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 ITPR1Q14643 2758 aa17.94■□□□□ 0.46
HDDC3-201ENST00000330334 SYCE3A1L190 88 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 H3BM21 787 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 INSIG1O15503 277 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 MMP20O60882 483 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 GP1BAP07359 652 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 UBASH3AP57075 661 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 CYP4F3Q08477 520 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 DPYSQ14117 519 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 PDE1CQ14123 709 aaPredicted RBP17.93■□□□□ 0.46
HDDC3-201ENST00000330334 PIGHQ14442 188 aaPredicted RBP17.93■□□□□ 0.46
HDDC3-201ENST00000330334 AGERQ15109 404 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 HES3Q5TGS1 186 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 LUZP1Q86V48 1076 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 ARHGAP12Q8IWW6 846 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 BTN2A2Q8WVV5 523 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 CELF6Q96J87 481 aaKnown RBP17.93■□□□□ 0.46
HDDC3-201ENST00000330334 NRSN2Q9GZP1 204 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 ZWILCHQ9H900 591 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 EVA1BQ9NVM1 165 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 NCKIPSDQ9NZQ3 722 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 CWC15Q9P013 229 aaKnown RBP17.93■□□□□ 0.46
HDDC3-201ENST00000330334 CAPN11Q9UMQ6 739 aa17.93■□□□□ 0.46
HDDC3-201ENST00000330334 CFAP69A5D8W1 941 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 K7ESM1 405 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 TPP1O14773 563 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 PALMO75781 387 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 SERPING1P05155 500 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 XPAP23025 273 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms