RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 UBE2Q2LH0YL09 131 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 IFNL4K9M1U5 179 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 JTBO76095 146 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 ZNF202O95125 648 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 HSPA4LO95757 839 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 HNRNPCP07910 306 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 SELLP14151 372 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 ZNF20P17024 532 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 PTPN2P17706 415 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 TNFRSF1AP19438 455 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 EDN2P20800 178 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 CHRNA5P30532 468 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 NRIP1P48552 1158 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 HDAC4P56524 1084 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 AIMP1Q12904 312 aaKnown RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 FOXI1Q12951 378 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 GALNT3Q14435 633 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 FGFBP1Q14512 234 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 ZNF169Q14929 603 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 PPP2R5BQ15173 497 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 ALG11Q2TAA5 492 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 FNDC7Q5VTL7 733 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 TBC1D9BQ66K14 1250 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 JADE1Q6IE81 842 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 CRELD2Q6UXH1 353 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 GLDNQ6ZMI3 551 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 GRASPQ7Z6J2 395 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 WDR5BQ86VZ2 330 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 TEX11Q8IYF3 940 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 GABPB2Q8TAK5 448 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 PRPF31Q8WWY3 499 aaKnown RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 PIGKQ92643 395 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 KAT2BQ92831 832 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 REPS1Q96D71 796 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 SAT2Q96F10 170 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 ZNF503Q96F45 646 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 APOL6Q9BWW8 343 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 PLEKHA4Q9H4M7 779 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 SLC35C2Q9NQQ7 365 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 PLK2Q9NYY3 685 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 MARCH4Q9P2E8 410 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-202ENST00000606785 CTNNAL1Q9UBT7 734 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 FBXL17Q9UF56 701 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 SLC8A2Q9UPR5 921 aa5.34□□□□□ -1.55
LINC00397-202ENST00000606785 COL4A3Q01955 1670 aa5.34□□□□□ -1.56
LINC00397-202ENST00000606785 AOX1Q06278 1338 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 FAM90A8PA6NJQ4 464 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 GLOD5A6NK44 160 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 NPIPB11E5RHQ5 1161 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 POC1B-GALNT4F8VUJ3 575 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 CTDSP2O14595 271 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 TFP02787 698 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 FAM90A13PP0C7W8 464 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 FAM90A24PP0C7X0 464 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 KRT10P13645 584 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 ST6GAL1P15907 406 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 TBXAS1P24557 533 aaPredicted RBP5.33□□□□□ -1.56
LINC00397-202ENST00000606785 TACR3P29371 465 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 SLC15A1P46059 708 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 LMAN1P49257 510 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 F2RL1P55085 397 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 RRP1P56182 461 aaKnown RBP5.33□□□□□ -1.56
LINC00397-202ENST00000606785 KRT83P78385 493 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 MTA1Q13330 715 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 PCLAFQ15004 111 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 KYNUQ16719 465 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 ASTE1Q2TB18 679 aaPredicted RBP5.33□□□□□ -1.56
LINC00397-202ENST00000606785 C1orf141Q5JVX7 400 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 KIAA1755Q5JYT7 1200 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 HECTD3Q5T447 861 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 KIAA0930Q6ICG6 404 aaPredicted RBP5.33□□□□□ -1.56
LINC00397-202ENST00000606785 CPLX2Q6PUV4 134 aaKnown RBP5.33□□□□□ -1.56
LINC00397-202ENST00000606785 LINC00346Q8IVM7 164 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 AVL9Q8NBF6 648 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 SGCDQ92629 289 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 PABPC5Q96DU9 382 aaKnown RBP5.33□□□□□ -1.56
LINC00397-202ENST00000606785 NDST4Q9H3R1 872 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 HIPK3Q9H422 1215 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 KIF9Q9HAQ2 790 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 MRGBPQ9NV56 204 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 TAB2Q9NYJ8 693 aa5.33□□□□□ -1.56
LINC00397-202ENST00000606785 FAM157AC9JC47 383 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 NDUFS3O75489 264 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 NFATC1O95644 943 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 TUBBP07437 444 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 CHRM5P08912 532 aaPredicted RBP5.32□□□□□ -1.56
LINC00397-202ENST00000606785 YWHAQP27348 245 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 HOXA13P31271 388 aaPredicted RBP5.32□□□□□ -1.56
LINC00397-202ENST00000606785 PTGER1P34995 402 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 PMS2P54278 862 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 UBXN2AP68543 259 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 FOXE3Q13461 319 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 TNFAIP1Q13829 316 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 MIIPQ5JXC2 388 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 TSTD2Q5T7W7 516 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 HMBOX1Q6NT76 420 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 DNAAF5Q86Y56 855 aa5.32□□□□□ -1.56
LINC00397-202ENST00000606785 DHX40Q8IX18 779 aaKnown RBP5.32□□□□□ -1.56
LINC00397-202ENST00000606785 KIAA2013Q8IYS2 634 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms