RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 SNAP29O95721 258 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 SYF2O95926 243 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 APOC1P02654 83 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CALB1P05937 261 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 KRT16P08779 473 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 RALAP11233 206 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 GNSP15586 552 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 PDHA2P29803 388 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ALDH4A1P30038 563 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 MAT2AP31153 395 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CTNNB1P35222 781 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 GP5P40197 560 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CLK3P49761 638 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ZNF75DP51815 510 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 SLC7A2P52569 658 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 SUCLG1P53597 346 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CACNB3P54284 484 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CACNA2D1P54289 1103 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 STX1BP61266 288 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 YWHAZP63104 245 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 TAP2Q03519 686 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 NAB1Q13506 487 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CUL4AQ13619 759 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 BMPR2Q13873 1038 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 RAB33AQ14088 237 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ODF1Q14990 250 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 PON2Q15165 354 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 PTGISQ16647 500 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 GTDC1Q4AE62 458 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 DNAL1Q4LDG9 190 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 FAM98BQ52LJ0 330 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 PRR16Q569H4 304 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 DGKKQ5KSL6 1271 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 TMEM63BQ5T3F8 832 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 FOXB2Q5VYV0 432 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 FAM205BPQ63HN1 556 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 C3orf33Q6P1S2 294 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ANKS3Q6ZW76 656 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 TRMT10CQ7L0Y3 403 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 UBE3BQ7Z3V4 1068 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 HDDC2Q7Z4H3 204 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 R3HCC1LQ7Z5L2 792 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 NEK8Q86SG6 692 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 TBC1D10CQ8IV04 446 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CRYBG2Q8N1P7 616 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CNTD1Q8N815 330 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 MCPH1Q8NEM0 835 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 OR9A1PQ8NGU1 263 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 POC1BQ8TC44 478 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ZNF384Q8TF68 577 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ZNF473Q8WTR7 871 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 KCTD4Q8WVF5 259 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 RAPGEF4Q8WZA2 1011 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 DPF2Q92785 391 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 TRIM43Q96BQ3 446 aaPredicted RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ZNF669Q96BR6 464 aaPredicted RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 DGCR14Q96DF8 476 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 VCPIP1Q96JH7 1222 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 FAM71F1Q96KD3 344 aaPredicted RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ZNF578Q96N58 590 aaPredicted RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 LENG8Q96PV6 779 aaPredicted RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CDK5RAP1Q96SZ6 601 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 KCNH6Q9H252 994 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 OR51V1Q9H2C8 321 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 HIPK3Q9H422 1215 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 BCAS3Q9H6U6 928 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 ZC4H2Q9NQZ6 224 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 RXFP3Q9NSD7 469 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 VPS54Q9P1Q0 977 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 WHRNQ9P202 907 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 IPO11Q9UI26 975 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 VPS28Q9UK41 221 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 CAPN11Q9UMQ6 739 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 WBP11Q9Y2W2 641 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 SAMHD1Q9Y3Z3 626 aaKnown RBP5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 MAPKBP1O60336 1514 aa5.92□□□□□ -1.46
LSM1P2-201ENST00000604911 FANCD2Q9BXW9 1451 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 A0A0U1RQJ8 604 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 LCHNA4D1U4 455 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 ARHGEF35A5YM69 484 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 CCDC85CA6NKD9 419 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 WRBO00258 174 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 AIM2O14862 343 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 TP73O15350 636 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 DENRO43583 198 aaKnown RBP5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 N4BP1O75113 896 aaKnown RBP5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 PEX11AO75192 247 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 RSL1D1O76021 490 aaKnown RBP5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 PTBP3O95758 552 aaKnown RBP5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 SERPINF2P08697 491 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 ICAM2P13598 275 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 RARGP13631 454 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 PRG2P13727 222 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 PAMP19021 973 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 CHMP24386 653 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 CNR2P34972 360 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 PCGF2P35227 344 aa5.91□□□□□ -1.46
LSM1P2-201ENST00000604911 ALDH1A3P47895 512 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms