RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RESTQ13127 1097 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 TUBB3Q13509 450 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 KCNAB1Q14722 419 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 SLC5A9Q2M3M2 681 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 COL28A1Q2UY09 1125 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF528Q3MIS6 628 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 PREPLQ4J6C6 727 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 CLLU1OSQ5K130 101 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 RBM20Q5T481 1227 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 STPG1Q5TH74 334 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 CACHD1Q5VU97 1274 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 TAF3Q5VWG9 929 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 TCEAL6Q6IPX3 200 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ZSCAN25Q6NSZ9 544 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 MRNIPQ6NTE8 343 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 MZT2AQ6P582 158 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 USP49Q70CQ1 688 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 SLC24A5Q71RS6 500 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 PALB2Q86YC2 1186 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ERC1Q8IUD2 1116 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 COLGALT2Q8IYK4 626 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ARHGAP45Q92619 1136 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 TCEAL3Q969E4 200 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 TMEM125Q96AQ2 219 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 TRIM44Q96DX7 344 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 RNF31Q96EP0 1072 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 C8orf49Q96NF6 230 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 KLHL5Q96PQ7 755 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 VN1R3Q9BXE9 311 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 FTHL17Q9BXU8 183 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 KRTAP3-1Q9BYR8 98 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 PCDHAC1Q9H158 963 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 MYLK2Q9H1R3 596 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 UNKLQ9H9P5 680 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ZBTB26Q9HCK0 441 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 RGS18Q9NS28 235 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 INTS13Q9NVM9 706 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 PARPBPQ9NWS1 579 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 C2orf42Q9NWW7 574 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF215Q9UL58 517 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 SSX2IPQ9Y2D8 614 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 MRPL11Q9Y3B7 192 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 MYH9P35579 1960 aaKnown RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 USP9XQ93008 2570 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-214ENST00000572365 ACACAQ13085 2346 aa5.85□□□□□ -1.47
SF3B3-214ENST00000572365 PI4KAP42356 2102 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 NUP205Q92621 2012 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 EML5Q05BV3 1969 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF462Q96JM2 2506 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 PLIN4Q96Q06 1357 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ABCB11O95342 1321 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 WDR19Q8NEZ3 1342 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 IGSF9BQ9UPX0 1349 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 FSD2A1L4K1 749 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 M0QZ92 97 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 INPPL1O15357 1258 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 IPO8O15397 1037 aaKnown RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 CDKL5O76039 1030 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 RASAL1O95294 804 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 NDUFA10O95299 355 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 FGAP02671 866 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 VTNP04004 478 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 NR4A1P22736 598 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 GATA3P23771 443 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 DDX6P26196 483 aaKnown RBP eCLIP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 MST1P26927 711 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 CCND2P30279 289 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 SLC5A2P31639 672 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ATICP31939 592 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ALDH7A1P49419 539 aaKnown RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 NOVA1P51513 510 aaKnown RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 SLC25A3Q00325 362 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 HTR4Q13639 388 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 E2F2Q14209 437 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 NONOQ15233 471 aaKnown RBP eCLIP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 MLF2Q15773 248 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 HSP90AB4PQ58FF6 505 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 FAXCQ5TGI0 409 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 MANEALQ5VSG8 457 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ICE2Q659A1 982 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 RAP1GAP2Q684P5 730 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 LAIR1Q6GTX8 287 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 RGS7BPQ6MZT1 257 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 TPRG1Q6ZUI0 275 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 SPARTQ8N0X7 666 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ATG16L2Q8NAA4 619 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 FAM71BQ8TC56 605 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 IPO4Q8TEX9 1081 aaKnown RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 SMG7Q92540 1137 aaKnown RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 DVL3Q92997 716 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 MYEOVQ96EZ4 313 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 B3GALT6Q96L58 329 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 FAM227BQ96M60 508 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 SCLT1Q96NL6 688 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 CDK5RAP1Q96SZ6 601 aaKnown RBP5.84□□□□□ -1.47
SF3B3-214ENST00000572365 C1QTNF3Q9BXJ4 246 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 PLA2G2FQ9BZM2 168 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms