RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 BRD8Q9H0E9 1235 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 RBM22Q9NW64 420 aaKnown RBP eCLIP12.1□□□□□ -0.474e-8■■■■□ 23.7
RABGGTA-218ENST00000560777 THADAQ6YHU6 1953 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 SPAG17Q6Q759 2223 aa12.1□□□□□ -0.47
RABGGTA-218ENST00000560777 ZFHX2Q9C0A1 2572 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 GON4LQ3T8J9 2241 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 PRR23AA6NEV1 266 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 C16orf96A6NNT2 1141 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 USP27XA6NNY8 438 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 C10orf142B7Z368 130 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 KCNK1O00180 336 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 SLC7A4O43246 635 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 TJP3O95049 919 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 PIGNO95427 931 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 SEMA4FO95754 770 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 JCHAINP01591 159 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 DHPSP49366 369 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 ADPRHP54922 357 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 MAXP61244 160 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 GRM3Q14832 879 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 PRKD1Q15139 912 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 NCEH1Q6PIU2 408 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 ARMCX6Q7L4S7 300 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 ZC3H18Q86VM9 953 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 CAMK1DQ8IU85 385 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 CNTD1Q8N815 330 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 OR14C36Q8NHC7 312 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 ACTL9Q8TC94 416 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 PPP1R16AQ96I34 528 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 ZNF641Q96N77 438 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 TUBGCP5Q96RT8 1024 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 IL12RB2Q99665 862 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 SUV39H2Q9H5I1 410 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 C6orf106Q9H6K1 298 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 NT5MQ9NPB1 228 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 DYRK4Q9NR20 520 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 ATP8A1Q9Y2Q0 1164 aa12.09□□□□□ -0.47
RABGGTA-218ENST00000560777 FRYLO94915 3013 aa12.08□□□□□ -0.47
RABGGTA-218ENST00000560777 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3DA0A087WVF3 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3IA0A087WXS9 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3EA0A087X179 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3KA0A087X1G2 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TCRBV7S2A1N4TA0A589 114 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3FA6NER0 549 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 FAM47DPA6NHR8 397 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3LB9A6J9 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TRAFD1O14545 582 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 PLRG1O43660 514 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 HLA-DQB2P05538 268 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 RETP07949 1114 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3HP0C7X1 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TIMP2P16035 220 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 ITPKAP23677 461 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 AP1S1P61966 158 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 OTUD4Q01804 1114 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 CCDC15Q0P6D6 951 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 KLF1Q13351 362 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 XRCC4Q13426 336 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 IHHQ14623 411 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 NOMO1Q15155 1222 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 ZNF569Q5MCW4 686 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 CCDC181Q5TID7 509 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3GQ6DHY5 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3CQ6IPX1 549 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 FBXL19Q6PCT2 694 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 PARS2Q7L3T8 475 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TBC1D3Q8IZP1 549 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 OR2T34Q8NGX1 318 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 HCAR2Q8TDS4 363 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TFB1MQ8WVM0 346 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 FOXJ1Q92949 421 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 FAM122AQ96E09 287 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 HSPA12BQ96MM6 686 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 PCED1AQ9H1Q7 454 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 KDM4CQ9H3R0 1056 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 SCUBE2Q9NQ36 999 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 TMEM74BQ9NUR3 256 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 DKK3Q9UBP4 350 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 AMACRQ9UHK6 382 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 JRKLQ9Y4A0 524 aa12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
RABGGTA-218ENST00000560777 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 BCLAF3A2AJT9 711 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 LRRC72A6NJI9 287 aa12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 HACD1B0YJ81 288 aa12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 KCNK3O14649 394 aa12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 ENC1O14682 589 aa12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 EPN2O95208 641 aa12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 IGHV4-34P06331 123 aa12.07□□□□□ -0.48
RABGGTA-218ENST00000560777 ADRB3P13945 408 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms