RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 PIGHQ14442 188 aaPredicted RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 RFTN1Q14699 578 aaPredicted RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 SHBQ15464 509 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 TMEM259Q4ZIN3 620 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 FIGNQ5HY92 759 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 PLEKHA7Q6IQ23 1121 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 ERAP2Q6P179 960 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 BRAT1Q6PJG6 821 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 KYAT3Q6YP21 454 aaKnown RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 LRRC69Q6ZNQ3 347 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 PTAR1Q7Z6K3 402 aaPredicted RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 PARGQ86W56 976 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 LSMEM2Q8N112 164 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 BBS5Q8N3I7 341 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 SLC25A45Q8N413 288 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 FAM181AQ8N9Y4 354 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 OR13H1Q8NG92 308 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 OR4C6Q8NH72 309 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 ATL2Q8NHH9 583 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 WDR48Q8TAF3 677 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 NSMCE1Q8WV22 266 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 BAP1Q92560 729 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 TSC1Q92574 1164 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 SYN2Q92777 582 aaPredicted RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 NXPE2Q96DL1 559 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 BMFQ96LC9 184 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 TUBGCP5Q96RT8 1024 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 IL12RB2Q99665 862 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 SLC13A1Q9BZW2 595 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 SUV39H2Q9H5I1 410 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 DHX35Q9H5Z1 703 aaKnown RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 HAUS4Q9H6D7 363 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 ZWILCHQ9H900 591 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 NLGN3Q9NZ94 848 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 SPASTQ9UBP0 616 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 UBA2Q9UBT2 640 aaPredicted RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 SALL4Q9UJQ4 1053 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 ZFR2Q9UPR6 939 aaKnown RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 CLCA2Q9UQC9 943 aa6.61□□□□□ -1.35
FOXN3-205ENST00000553904 TNRC6BQ9UPQ9 1833 aaKnown RBP6.61□□□□□ -1.35
FOXN3-205ENST00000553904 CKAP5Q14008 2032 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PCDH15Q96QU1 1955 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 DMXL1Q9Y485 3027 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 A0A1B0GTH6 734 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 TCRBV5S1A1TA0A578 114 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 TMEM191CA6NGB0 347 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 LRRC53A6NM62 1247 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 TEX33O43247 280 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 SIGLEC6O43699 453 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 SDC3O75056 442 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PIAS2O75928 621 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 GJB6O95452 261 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 CD160O95971 181 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 UGT2B4P06133 528 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 CKMT1AP12532 417 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 KRT10P13645 584 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 CTSEP14091 401 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 JUNDP17535 347 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 SERPINA4P29622 427 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 ACADVLP49748 655 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PEX5P50542 639 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 UBASH3AP57075 661 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 CLDN2P57739 230 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 BCL2L1Q07817 233 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 TARDBPQ13148 414 aaKnown RBP eCLIP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 DNAJC3Q13217 504 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PDE1CQ14123 709 aaPredicted RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 NR1I3Q14994 352 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 UGP2Q16851 508 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 TSR1Q2NL82 804 aaKnown RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PROX2Q3B8N5 592 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PPP1R15BQ5SWA1 713 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 FAXCQ5TGI0 409 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 SEL1L3Q68CR1 1132 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 ESRP1Q6NXG1 681 aaKnown RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 CAVIN1Q6NZI2 390 aaKnown RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 ZCCHC8Q6NZY4 707 aaKnown RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PARS2Q7L3T8 475 aaKnown RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 APTXQ7Z2E3 356 aaKnown RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 LRRC49Q8IUZ0 686 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 NDUFAF2Q8N183 169 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 PYROXD2Q8N2H3 581 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 MDM1Q8TC05 714 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 HMCESQ96FZ2 354 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 TBATAQ96M53 351 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 ZNF599Q96NL3 588 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 MYOCQ99972 504 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 ANP32EQ9BTT0 268 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 ATP13A3Q9H7F0 1226 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 SCUBE2Q9NQ36 999 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 NDFIP2Q9NV92 336 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 TMEM63CQ9P1W3 806 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 CNOT8Q9UFF9 292 aaKnown RBP6.6□□□□□ -1.35
FOXN3-205ENST00000553904 LCMT1Q9UIC8 334 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 LHX6Q9UPM6 363 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 AP4E1Q9UPM8 1137 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 CEP192Q8TEP8 1941 aa6.6□□□□□ -1.35
FOXN3-205ENST00000553904 FRYLO94915 3013 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms