RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TMEM253P0C7T8 217 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 KCNA4P22459 653 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 ARL4AP40617 200 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 CSNK1DP48730 415 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 CCT8P50990 548 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 ADKP55263 362 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 NXPH1P58417 271 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 RHOAP61586 193 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 GRM3Q14832 879 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 SUZ12Q15022 739 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 SMTNL2Q2TAL5 461 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 FBXL19Q6PCT2 694 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 GDPD4Q6W3E5 623 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 GLRX5Q86SX6 157 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 OR6K2Q8NGY2 324 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 HCAR2Q8TDS4 363 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 CTNNBL1Q8WYA6 563 aaPredicted RBP17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 CSPG4P5Q96PW8 444 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 ELF4Q99607 663 aaPredicted RBP17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 PACSIN1Q9BY11 444 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 PCDH18Q9HCL0 1135 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 ANKRD36A6QL64 1941 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 COL5A1P20908 1838 aaPredicted RBP17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 ASPMQ8IZT6 3477 aa17.44■□□□□ 0.38
SFSWAP-205ENST00000537164 AREL1O15033 823 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 TSPAN6O43657 245 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 PROSCO94903 275 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 UGT2B4P06133 528 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 IL4RP24394 825 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 ARSEP51690 589 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 RPS21P63220 83 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 FAM193AP78312 1265 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 IL10RBQ08334 325 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 RFTN1Q14699 578 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 RYBPQ8N488 228 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 FAM174AQ8TBP5 190 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 ASB12Q8WXK4 309 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 HSPH1Q92598 858 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 FEM1CQ96JP0 617 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 KLHL32Q96NJ5 620 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 ZNF599Q96NL3 588 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 CAMK1GQ96NX5 476 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 DEF6Q9H4E7 631 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 NHEJ1Q9H9Q4 299 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 GDF3Q9NR23 364 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 CTTNBP2NLQ9P2B4 639 aa17.43■□□□□ 0.38
SFSWAP-205ENST00000537164 TSPAN11A1L157 253 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 AKR1B15C9JRZ8 316 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 KCNK3O14649 394 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 YKT6O15498 198 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 SPINT1O43278 529 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 AKR1B10O60218 316 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 PCDH8O95206 1070 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 HNRNPA2B1P22626 353 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 MAN1A1P33908 653 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 ABL2P42684 1182 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 RXRGP48443 463 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 SUOXP51687 545 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 SIM1P81133 766 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 NSUN2Q08J23 767 aaKnown RBP eCLIP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 STAT4Q14765 748 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 SHBQ15464 509 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 TRIP6Q15654 476 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 HADHQ16836 314 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 SEL1L3Q68CR1 1132 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 SPATS2Q86XZ4 545 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 OXR1Q8N573 874 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 CCDC42Q96M95 316 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 C1QTNF2Q9BXJ5 285 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 SLC17A9Q9BYT1 436 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 ETNK2Q9NVF9 386 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 IPO11Q9UI26 975 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 ANGPTL2Q9UKU9 493 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 HS3ST3A1Q9Y663 406 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 EPG5Q9HCE0 2579 aa17.42■□□□□ 0.38
SFSWAP-205ENST00000537164 WDFY3Q8IZQ1 3526 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 SPAARA0A1B0GVQ0 90 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 SLC31A1O15431 190 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 PALMO75781 387 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 MTA2O94776 668 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 AMPD1P23109 780 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 FGL2Q14314 439 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 TCEAL1Q15170 157 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 TMCO3Q6UWJ1 677 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 ARHGAP36Q6ZRI8 547 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 ABI3BPQ7Z7G0 1075 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 TP53INP2Q8IXH6 220 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 NETO2Q8NC67 525 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 ZNF641Q96N77 438 aaPredicted RBP17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 LENG8Q96PV6 779 aaPredicted RBP17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 PSKH2Q96QS6 385 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 TUBGCP5Q96RT8 1024 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 TRIM5Q9C035 493 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 GPR27Q9NS67 375 aa17.41■□□□□ 0.38
SFSWAP-205ENST00000537164 ARID1BQ8NFD5 2236 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-205ENST00000537164 LRRK1Q38SD2 2015 aa17.4■□□□□ 0.38
SFSWAP-205ENST00000537164 DFFAO00273 331 aa17.4■□□□□ 0.38
SFSWAP-205ENST00000537164 INSIG1O15503 277 aa17.4■□□□□ 0.38
SFSWAP-205ENST00000537164 TRIM16O95361 564 aa17.4■□□□□ 0.38
SFSWAP-205ENST00000537164 PEX11BO96011 259 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms