RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 IQCF3P0C7M6 154 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 FGFR3P22607 806 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 MAGEA10P43363 369 aaPredicted RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 GALNT1Q10472 559 aaPredicted RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 SPATS1Q496A3 300 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 INTS6LQ5JSJ4 861 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 DNAAF3Q8N9W5 541 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 PNPT1Q8TCS8 783 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 KCTD4Q8WVF5 259 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 PLEKHA8Q96JA3 519 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 MRPL57Q9BQC6 102 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 MRPL45Q9BRJ2 306 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 KIFC1Q9BW19 673 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 CEP41Q9BYV8 373 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 RHOBTB2Q9BYZ6 727 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 TRPC7Q9HCX4 862 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 FAM49BQ9NUQ9 324 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 SMOXQ9NWM0 555 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 HOXC10Q9NYD6 342 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 TRHDEQ9UKU6 1024 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 COQ6Q9Y2Z9 468 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 CROCCQ5TZA2 2017 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 FUOMA2VDF0 154 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 IQCA1LA6NCM1 817 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 UBDO15205 165 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 NRP2O60462 931 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 SNAP91O60641 907 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 ATE1O95260 518 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 ESRRBO95718 433 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 MYL3P08590 195 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 CKMT2P17540 419 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 GTF2A2P52657 109 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 C21orf59P57076 290 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 GALNT2Q10471 571 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 MERTKQ12866 999 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 SMAD1Q15797 465 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 GADL1Q6ZQY3 521 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 NT5C3BQ969T7 300 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 PPWD1Q96BP3 646 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 CCDC126Q96EE4 140 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 MOCOSQ96EN8 888 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 GPR20Q99678 358 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 APBA2Q99767 749 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 C9orf16Q9BUW7 83 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 PAIP1Q9H074 479 aaKnown RBP17.94■□□□□ 0.46
NUP54-205ENST00000507257 DNAJC5Q9H3Z4 198 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 MYOZ2Q9NPC6 264 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 ZNF112Q9UJU3 913 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 CDC14AQ9UNH5 594 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 SLC30A1Q9Y6M5 507 aa17.94■□□□□ 0.46
NUP54-205ENST00000507257 BBIP1A8MTZ0 92 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 MRASO14807 208 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 NELFEP18615 380 aaKnown RBP17.93■□□□□ 0.46
NUP54-205ENST00000507257 ATP5F1P24539 256 aaPredicted RBP17.93■□□□□ 0.46
NUP54-205ENST00000507257 TKTL1P51854 596 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 RAB10P61026 200 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 PRMT9Q6P2P2 845 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 ANKRD13AQ8IZ07 590 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 ZNF786Q8N393 782 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 CLEC4CQ8WTT0 213 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 SEPT8Q92599 483 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 SLC35B4Q969S0 331 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 VAT1Q99536 393 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 AGPAT4Q9NRZ5 378 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 RALGAPA2Q2PPJ7 1873 aa17.93■□□□□ 0.46
NUP54-205ENST00000507257 GIPC1O14908 333 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 PHGDHO43175 533 aaKnown RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 DAB1O75553 588 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 TIPRLO75663 272 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 PTPRAP18433 802 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 ABCG1P45844 678 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 BCAP31P51572 246 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 AIF1P55008 147 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 ANKDD1AQ495B1 522 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 C1QTNF12Q5T7M4 302 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 GRAMD4Q6IC98 578 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 NIPAL1Q6NVV3 410 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 SPRED1Q7Z699 444 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 PTAR1Q7Z6K3 402 aaPredicted RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 FAM131BQ86XD5 332 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 PDPRQ8NCN5 879 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 FEM1CQ96JP0 617 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 HNRNPABQ99729 332 aaKnown RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 EML4Q9HC35 981 aaKnown RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 INIPQ9NRY2 104 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 ABCD2Q9UBJ2 740 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 CLEC11AQ9Y240 323 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 DERAQ9Y315 318 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 NME7Q9Y5B8 376 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 ZNF638Q14966 1978 aaKnown RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 A0A087X1B8 175 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 PSMD3O43242 534 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 OCM2P0CE71 109 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 OCMP0CE72 109 aaPredicted RBP17.92■□□□□ 0.46
NUP54-205ENST00000507257 OXCT1P55809 520 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 ATP6V0D1P61421 351 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 RALGDSQ12967 914 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 BNIP2Q12982 314 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 OLIG2Q13516 323 aa17.92■□□□□ 0.46
NUP54-205ENST00000507257 ATP6AP1Q15904 470 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms