RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PIAS4Q8N2W9 510 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 FAM151AQ8WW52 585 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 CLIP3Q96DZ5 547 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 GIN1Q9NXP7 522 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 GTSE1Q9NYZ3 720 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 DTLQ9NZJ0 730 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 N6AMT1Q9Y5N5 214 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 STYXL1Q9Y6J8 313 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 TCRBV3S1A0A5B6 114 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 SDHDO14521 159 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 TRIM24O15164 1050 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 MTHFD1P11586 935 aaKnown RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 CNTFP26441 200 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 SLC7A1P30825 629 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 HOXD11P31277 338 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 HPCAL1P37235 193 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 TPTEP56180 551 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 C1QTNF8P60827 252 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 TSPY1Q01534 308 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 SEPT6Q14141 434 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 CAPRIN1Q14444 709 aaKnown RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 SPCS2Q15005 226 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 PHKG1Q16816 387 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 PPP4R4Q6NUP7 873 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 FAM117BQ6P1L5 589 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 VASH1Q7L8A9 365 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 APOBEC3FQ8IUX4 373 aaKnown RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 CLIP4Q8N3C7 705 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 PSD4Q8NDX1 1056 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 MCPH1Q8NEM0 835 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 USP33Q8TEY7 942 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 SNX19Q92543 992 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 HEXIM2Q96MH2 286 aaKnown RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 ALPK1Q96QP1 1244 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 EHD1Q9H4M9 534 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 EVLQ9UI08 416 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 IPO11Q9UI26 975 aaKnown RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 MAGED1Q9Y5V3 778 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 SNX9Q9Y5X1 595 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 FAM155AB1AL88 458 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 BAIAP3O94812 1187 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 ICAM1P05362 532 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 GOT1P17174 413 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 CCNA2P20248 432 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 RAD23AP54725 363 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 KRT76Q01546 638 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 PTPN11Q06124 597 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 AQP6Q13520 282 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 SEMA5AQ13591 1074 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 LRP8Q14114 963 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 PRPSAP1Q14558 356 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 INAVAQ3KP66 663 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 CERCAMQ5T4B2 595 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 CNSTQ6PJW8 725 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 IFNEQ86WN2 208 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 BRSK2Q8IWQ3 736 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 CMTR2Q8IYT2 770 aaKnown RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 ZNF280CQ8ND82 737 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 MAGEE2Q8TD90 523 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 FEM1CQ96JP0 617 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 RBBP8Q99708 897 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 PIF1Q9H611 641 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 UBP1Q9NZI7 540 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 BCAP29Q9UHQ4 241 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 FBXO9Q9UK97 447 aaPredicted RBP8.03□□□□□ -1.12
TPM3-215ENST00000469717 TCAF1Q9Y4C2 921 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 FER1L6Q2WGJ9 1857 aa8.03□□□□□ -1.12
TPM3-215ENST00000469717 SYNJ2BP-COX16A0A087WUM0 186 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 TRIM64CA6NLI5 447 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 PSMD11O00231 422 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 TADA2AO75478 443 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 BCL10O95999 233 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 TPSB2P20231 275 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 NR4A2P43354 598 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 ACTR2P61160 394 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 CAPSQ13938 189 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 GRM3Q14832 879 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 TPSAB1Q15661 275 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 CCDC153Q494R4 210 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 PYCR3Q53H96 274 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 DEPDC1Q5TB30 811 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 KDM1BQ8NB78 822 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 GLT1D1Q96MS3 346 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 DOK1Q99704 481 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 DGCR6LQ9BY27 220 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 DRC3Q9H069 523 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 PXMP2Q9NR77 195 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 CHRAC1Q9NRG0 131 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 COX16Q9P0S2 106 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 SUCOQ9UBS9 1254 aaKnown RBP8.02□□□□□ -1.12
TPM3-215ENST00000469717 USP22Q9UPT9 525 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 PTGDR2Q9Y5Y4 395 aa8.02□□□□□ -1.12
TPM3-215ENST00000469717 MRPL42Q9Y6G3 142 aaKnown RBP8.02□□□□□ -1.12
TPM3-215ENST00000469717 RNF103O00237 685 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 B4GALT5O43286 388 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 DLX3O60479 287 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 PEX14O75381 377 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 JRKO75564 520 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 GCATO75600 419 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms