RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MATN3O15232 486 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 HDAC3O15379 428 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 UNC5CO95185 931 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 INSCQ1MX18 579 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 OTOP3Q7RTS5 596 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 PTGR2Q8N8N7 351 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-203ENST00000467558 BBS2Q9BXC9 721 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 ARL15Q9NXU5 204 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 XPR1Q9UBH6 696 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 TMEM59LQ9UK28 342 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 PTPRJQ12913 1337 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 IGKV6D-21A0A0A0MT36 114 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 AGPSO00116 658 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ATP6V1G2O95670 118 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 C1RP00736 705 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CATP04040 527 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 C2P06681 752 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 IL1R2P27930 398 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TKTP29401 623 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 GHRHRQ02643 423 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SGCGQ13326 291 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 HNRNPDQ14103 355 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CMC1Q7Z7K0 106 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TTC7BQ86TV6 843 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TDRPQ86YL5 185 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 MIER2Q8N344 545 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 OR9Q1Q8NGQ5 310 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SLC35F5Q8WV83 523 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 DDX1Q92499 740 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SLC7A5P2Q9GIP4 190 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 LGALS13Q9UHV8 139 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 GNPTGQ9UJJ9 305 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ZNF180Q9UJW8 692 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SNX13Q9Y5W8 968 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 MRASO14807 208 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ACSL4O60488 711 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ARL4DP49703 201 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ATXN1P54253 815 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 FRG1Q14331 258 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CRY1Q16526 586 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CA9Q16790 459 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 PRMT9Q6P2P2 845 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 B3GNT9Q6UX72 402 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 PHACTR4Q8IZ21 702 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 FUKQ8N0W3 1084 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 GRIN3AQ8TCU5 1115 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 PPP1R16AQ96I34 528 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 LPIN3Q9BQK8 851 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SLC25A51Q9H1U9 297 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 STN1Q9H668 368 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CCDC167Q9P0B6 97 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 KIAA1522Q9P206 1035 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 RAP2CQ9Y3L5 183 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 MYH7P12883 1935 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 NAV1Q8NEY1 1877 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 NWD2Q9ULI1 1742 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ARVCFO00192 962 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CD3EAPO15446 510 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ATP6V0D1P61421 351 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 OCA2Q04671 838 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 GALNT3Q14435 633 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TRIP4Q15650 581 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 LIPMQ5VYY2 423 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 HORMAD1Q86X24 394 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 RASAL3Q86YV0 1011 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 RTL3Q8N8U3 475 aaKnown RBP13.91□□□□□ -0.18
BRAT1-203ENST00000467558 MAB21L3Q8N8X9 362 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SERAC1Q96JX3 654 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TMPRSS4Q9NRS4 437 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TMCO1Q9UM00 188 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TIAM2Q8IVF5 1701 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SYNDIG1LA6NDD5 238 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 GJA9P57773 515 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 TCEAL1Q15170 157 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CYP51A1Q16850 503 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SUSD3Q96L08 255 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 VRTNQ9H8Y1 702 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 CHRAC1Q9NRG0 131 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 SLC17A7Q9P2U7 560 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 PLLPQ9Y342 182 aa13.91□□□□□ -0.18
BRAT1-203ENST00000467558 ZSCAN9O15535 394 aaPredicted RBP13.9□□□□□ -0.18
BRAT1-203ENST00000467558 ALBP02768 609 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 ANXA5P08758 320 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 ACADMP11310 421 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 CRHR1P34998 444 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 PLOD1Q02809 727 aaPredicted RBP13.9□□□□□ -0.18
BRAT1-203ENST00000467558 ZDHHC24Q6UX98 284 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 MAGEH1Q9H213 219 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 ZDHHC18Q9NUE0 388 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 CHKBQ9Y259 395 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 NDST3O95803 873 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 PROCP04070 461 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 BPGMP07738 259 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms