RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 KLBQ86Z14 1044 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TICAM1Q8IUC6 712 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 CADM3Q8N126 398 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 OR4N2Q8NGD1 307 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 CACTINQ8WUQ7 758 aaKnown RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 VPS33AQ96AX1 596 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 REPS1Q96D71 796 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 SAT2Q96F10 170 aaPredicted RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 ELMOD3Q96FG2 381 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 HIC2Q96JB3 615 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 JAKMIP1Q96N16 626 aaKnown RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 BBC3Q96PG8 261 aaPredicted RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 GPATCH1Q9BRR8 931 aaKnown RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TUBB6Q9BUF5 446 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 C1QTNF5Q9BXJ0 243 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 ENTPD7Q9NQZ7 604 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC2A4RGQ9NR83 387 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TAB2Q9NYJ8 693 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 FOXJ2Q9P0K8 574 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 DLGAP2Q9P1A6 1054 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 MTMR6Q9Y217 621 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TESMINQ9Y4I5 508 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TRPV2Q9Y5S1 764 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 hCG_1809904A0A1W2PP81 198 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 A0A1W2PPE2 198 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 A0A1W2PR64 198 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 WIPF3A6NGB9 483 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 FAM157AC9JC47 383 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TPPPO94811 219 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 IPO7O95373 1038 aaKnown RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TGDSO95455 350 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 AFPP02771 609 aaKnown RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 C8AP07357 584 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 IL7RP16871 459 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SAT1P21673 171 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 HOXA13P31271 388 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 HOXC13P31276 330 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SHMT1P34896 483 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 THPOP40225 353 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TNNT3P45378 269 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 CAMPP49913 170 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SUOXP51687 545 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 GALCP54803 685 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TAP1Q03518 808 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 FOXI1Q12951 378 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 IKQ13123 557 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 GRAPQ13588 217 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 BAATQ14032 418 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 ADIPOQQ15848 244 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 ASIC2Q16515 512 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SYTL3Q4VX76 610 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TCP11X2Q5H9J9 407 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SPDYAQ5MJ70 313 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 C10orf76Q5T2E6 689 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 FNDC7Q5VTL7 733 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TMEM65Q6PI78 240 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 NOXA1Q86UR1 476 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 CREBRFQ8IUR6 639 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 KIAA2013Q8IYS2 634 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 C16orf71Q8IYS4 520 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 OR8H3Q8N146 312 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC44A3Q8N4M1 653 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 AMER2Q8N7J2 671 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 ARL14EPQ8N8R7 260 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 POMGNT2Q8NAT1 580 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 CXorf38Q8TB03 319 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 DUSP19Q8WTR2 217 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 HDAC7Q8WUI4 952 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 ZFPM2Q8WW38 1151 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 LINC00476Q8WZB0 136 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 LRRC59Q96AG4 307 aaKnown RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 PDLIM2Q96JY6 352 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TEFMQ96QE5 360 aaKnown RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 FRG2BQ96QU4 278 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 PAFAH2Q99487 392 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SYT17Q9BSW7 474 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TM2D2Q9BX73 214 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 NUF2Q9BZD4 464 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TRIM2Q9C040 744 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 NUAK2Q9H093 628 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 PLK3Q9H4B4 646 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 RETREG1Q9H6L5 497 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 GRPEL1Q9HAV7 217 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 RANGRFQ9HD47 186 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC35C2Q9NQQ7 365 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 OGFRQ9NZT2 677 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 TCAF1Q9Y4C2 921 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 LSM4Q9Y4Z0 139 aaKnown RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 EPN1Q9Y6I3 576 aaPredicted RBP4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 EMSYQ7Z589 1322 aa4.37□□□□□ -1.71
HMGN3P1-201ENST00000453847 CYP2D7A0A087X1C5 515 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 HCRTR2O43614 444 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC25A17O43808 307 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 NKX2-2O95096 273 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 IL1AP01583 271 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 C6P13671 934 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC2A4P14672 509 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 POU1F1P28069 291 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms