RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 UGT2B11O75310 529 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 MFN2O95140 757 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CFBP00751 764 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 DDX5P17844 614 aaKnown RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 MIPP30301 263 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 SHMT2P34897 504 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 SLC7A2P52569 658 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ZACNQ401N2 412 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 GPAT2Q6NUI2 795 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 MCUQ8NE86 351 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 SHCBP1Q8NEM2 672 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 HMGCLL1Q8TB92 370 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CDKL2Q92772 493 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 SP140LQ9H930 580 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 RSAD1Q9HA92 442 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CCM2LQ9NUG4 571 aaPredicted RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 VWA5AO00534 786 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 SLC22A1O15245 554 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 GPC4O75487 556 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CCNKO75909 580 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ITIH1P19827 911 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 FASP25445 335 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 OXTRP30559 389 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 MAGEA6P43360 314 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ABCG1P45844 678 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ARCN1P48444 511 aaKnown RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 CDH6P55285 790 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 GALK2Q01415 458 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 FPGSQ05932 587 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 PIGFQ07326 219 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CTF1Q16619 201 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CDONQ4KMG0 1287 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CATSPEREQ5SY80 951 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ZCCHC8Q6NZY4 707 aaKnown RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 USP51Q70EK9 711 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 SPRED1Q7Z699 444 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 LINC00523Q86TU6 105 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ELMOD2Q8IZ81 293 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 WDTC1Q8N5D0 677 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 NDNFQ8TB73 568 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 MAGED4Q96JG8 741 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 YTHDF1Q9BYJ9 559 aaKnown RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 SLC7A5P2Q9GIP4 190 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 EPS8L2Q9H6S3 715 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 DDX4Q9NQI0 724 aaKnown RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.92□□□□□ -0.34
HERC3-203ENST00000407637 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ARHGAP28Q9P2N2 729 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 HNRNPDLO14979 420 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 KRT8P05787 483 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 HSPA1AP0DMV8 641 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 HSPA1BP0DMV9 641 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 NAT2P11245 290 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 RPS9P46781 194 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 GRIA4P48058 902 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 SEPHS1P49903 392 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 SLC26A2P50443 739 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 ILF2Q12905 390 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 SLC12A1Q13621 1099 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 CRY1Q16526 586 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 SAMD4BQ5PRF9 694 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 ZBTB41Q5SVQ8 909 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 PMF1Q6P1K2 205 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 SPPL2CQ8IUH8 684 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 DCLK2Q8N568 766 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 TMEM35BQ8NCS4 154 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 OSCP1Q8WVF1 389 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 MUS81Q96NY9 551 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 PEBP4Q96S96 227 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 COQ7Q99807 217 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 ALOXE3Q9BYJ1 711 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 ADNPQ9H2P0 1102 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 AASDHPPTQ9NRN7 309 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 GIMAP4Q9NUV9 329 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 ADPRHL2Q9NX46 363 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 EIF3LQ9Y262 564 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 BOLA1Q9Y3E2 137 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 PMF1-BGLAPU3KQ54 211 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 RGPD3A6NKT7 1758 aaPredicted RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 SRP72O76094 671 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 TOMM70O94826 608 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 IL7RP16871 459 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 MAGP20916 626 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 AXLP30530 894 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 NPTX2P47972 431 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 CLCNKBP51801 687 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 LSM3P62310 102 aaKnown RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 GEN1Q17RS7 908 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 IRAK1BP1Q5VVH5 260 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 NEK5Q6P3R8 708 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
HERC3-203ENST00000407637 B3GNT4Q9C0J1 378 aa12.91□□□□□ -0.34
HERC3-203ENST00000407637 CLPBQ9H078 707 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms