RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 RAB7BQ96AH8 199 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 CENPTQ96BT3 561 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 WBP1Q96G27 269 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 PRR11Q96HE9 360 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-202ENST00000374426 SLC46A1Q96NT5 459 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 IL12RB2Q99665 862 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 BOCQ9BWV1 1114 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 NAA15Q9BXJ9 866 aaKnown RBP14.01□□□□□ -0.17
CXCL12-202ENST00000374426 DPH1Q9BZG8 443 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 OR12D3Q9UGF7 316 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 NEU3Q9UQ49 428 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 ENTPD2Q9Y5L3 495 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 HECTD1Q9ULT8 2610 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 CHD5Q8TDI0 1954 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 PMS2P1A4D2B8 440 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 FAM72CH0Y354 149 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 KRIT1O00522 736 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 NEMP1O14524 444 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 AREL1O15033 823 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 MUSKO15146 869 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 UGT2B4P06133 528 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 MMEP08473 750 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 ADRA1BP35368 520 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 ETFBP38117 255 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 NOMO3P69849 1222 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 SKOR1P84550 965 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 NRG1Q02297 640 aaPredicted RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 VAC14Q08AM6 782 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 NR0B2Q15466 257 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 TPD52L1Q16890 204 aaPredicted RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 FAM72AQ5TYM5 149 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 KLHDC7AQ5VTJ3 777 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 NAA35Q5VZE5 725 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 FAM72DQ6L9T8 149 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 LEKR1Q6ZMV7 388 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 RBM44Q6ZP01 1051 aaKnown RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 FAM72BQ86X60 149 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 SLC35F3Q8IY50 421 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 RYBPQ8N488 228 aaPredicted RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 OR2AP1Q8NGE2 309 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 TPCN2Q8NHX9 752 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 EPS8L1Q8TE68 723 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 ARHGEF2Q92974 986 aaKnown RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 GRAMD1AQ96CP6 724 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 MAGEB5Q9BZ81 275 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 SEMA4CQ9C0C4 833 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 METTL5Q9NRN9 209 aaKnown RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 SPASTQ9UBP0 616 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 APOBEC3BQ9UH17 382 aaKnown RBP14□□□□□ -0.17
CXCL12-202ENST00000374426 DNAI1Q9UI46 699 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 PCDHGA8Q9Y5G5 932 aa14□□□□□ -0.17
CXCL12-202ENST00000374426 CAPN8A6NHC0 703 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 LMO7DNF2Z398 122 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 TCEA3O75764 348 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 GSRP00390 522 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 PRKCSHP14314 528 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 UCHL3P15374 230 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 RHOQP17081 205 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 RBMS1P29558 406 aaKnown RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 IGFALSP35858 605 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 MAPKAPK2P49137 400 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 THOP1P52888 689 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 PDX1P52945 283 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 GEMIN4P57678 1058 aaKnown RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 C1orf61Q13536 156 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 POLD3Q15054 466 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 C15orf59Q2T9L4 293 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 MYLK3Q32MK0 819 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 CCDC14Q49A88 953 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 HSP90AA4PQ58FG1 418 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 PRRT3Q5FWE3 981 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 LRRC73Q5JTD7 316 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 ATXN7L2Q5T6C5 722 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 RWDD4Q6NW29 188 aaKnown RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 VPS36Q86VN1 386 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 PHACTR4Q8IZ21 702 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 MSANTD4Q8NCY6 345 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 BTN2A2Q8WVV5 523 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 TTC9Q92623 222 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 ARHGEF26Q96DR7 871 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 KLHL32Q96NJ5 620 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 LRRC61Q9BV99 259 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 MAGEH1Q9H213 219 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 TMEM248Q9NWD8 314 aa13.99□□□□□ -0.17
CXCL12-202ENST00000374426 TLN1Q9Y490 2541 aaKnown RBP13.99□□□□□ -0.17
CXCL12-202ENST00000374426 NAV2Q8IVL1 2488 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 CDRT15L2A8MXV6 281 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 F8VZ95 297 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 LRIG2O94898 1065 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 POP4O95707 220 aaKnown RBP13.98□□□□□ -0.17
CXCL12-202ENST00000374426 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
CXCL12-202ENST00000374426 SNRPD1P62314 119 aaKnown RBP13.98□□□□□ -0.17
CXCL12-202ENST00000374426 LY6DQ14210 128 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 PTK2BQ14289 1009 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 CDO1Q16878 200 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 C6orf132Q5T0Z8 1188 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms