RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CHRNGP07510 517 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 PPARGP37231 505 aaPredicted RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 POU4F1Q01851 419 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 TNK2Q07912 1038 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 ARL13AQ5H913 290 aaPredicted RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 MSANTD2Q6P1R3 559 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 LRRTM3Q86VH5 581 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 SLC41A1Q8IVJ1 513 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 LSMEM2Q8N112 164 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 USP33Q8TEY7 942 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 MAELQ96JY0 434 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 TTC1Q99614 292 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 PPP1R12CQ9BZL4 782 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 MRPL46Q9H2W6 279 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 CPSF2Q9P2I0 782 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 PDP2Q9P2J9 529 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 RUVBL2Q9Y230 463 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 MKI67P46013 3256 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 PHGDHO43175 533 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 BRCC3P46736 316 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 CD151P48509 253 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 SLC5A3P53794 718 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 RFTN1Q14699 578 aaPredicted RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 LSM12Q3MHD2 195 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 KBTBD6Q86V97 674 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 PDSS2Q86YH6 399 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 SLC25A41Q8N5S1 370 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 IPMKQ8NFU5 416 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 ABHD8Q96I13 439 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 FCRL2Q96LA5 508 aaPredicted RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 MRGPRX2Q96LB1 330 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 LENG8Q96PV6 779 aaPredicted RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 MRPL57Q9BQC6 102 aaKnown RBP25.34■■□□□ 1.65
ROM1-201ENST00000278833 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.34■■□□□ 1.65
ROM1-201ENST00000278833 STK39Q9UEW8 545 aa25.34■■□□□ 1.65
ROM1-201ENST00000278833 DLX3O60479 287 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 MT-CYBP00156 380 aaPredicted RBP25.33■■□□□ 1.65
ROM1-201ENST00000278833 TFEBP19484 476 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 SLC14A2Q15849 920 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 ESRP1Q6NXG1 681 aaKnown RBP25.33■■□□□ 1.65
ROM1-201ENST00000278833 PIWIL4Q7Z3Z4 852 aaKnown RBP25.33■■□□□ 1.65
ROM1-201ENST00000278833 MFSD6LQ8IWD5 586 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 SHKBP1Q8TBC3 707 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 SERPINI1Q99574 410 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 PAK6Q9NQU5 681 aaPredicted RBP25.33■■□□□ 1.65
ROM1-201ENST00000278833 XPR1Q9UBH6 696 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 PCDHB8Q9UN66 801 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 CDYLQ9Y232 598 aa25.33■■□□□ 1.65
ROM1-201ENST00000278833 GOLGA8QA0A0J9YX86 632 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 GOLGA8OA6NCC3 632 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 GOLGA8NF8WBI6 632 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 MGEA5O60502 916 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 TADA2AO75478 443 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 PAPSS2O95340 614 aaPredicted RBP25.32■■□□□ 1.64
ROM1-201ENST00000278833 F7P08709 466 aaPredicted RBP25.32■■□□□ 1.64
ROM1-201ENST00000278833 CTSHP09668 335 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SLC1A2P43004 574 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 TUBP50607 506 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 EPHB1P54762 984 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 POU6F1Q14863 301 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 KDELC1Q6UW63 502 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 RNF111Q6ZNA4 994 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SCD5Q86SK9 330 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 GABPB2Q8TAK5 448 aaPredicted RBP25.32■■□□□ 1.64
ROM1-201ENST00000278833 CASP10Q92851 521 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SERPINB11Q96P15 392 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 TRAPPC9Q96Q05 1148 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SLC25A51Q9H1U9 297 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 MAN1C1Q9NR34 630 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 CLIC5Q9NZA1 410 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 PADI3Q9ULW8 664 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SEPT4O43236 478 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 VAPBO95292 243 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 BAG2O95816 211 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 MPP1Q00013 466 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 GNASQ5JWF2 1037 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 TSTD2Q5T7W7 516 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 TMEM126BQ8IUX1 230 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SCAMP5Q8TAC9 235 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 CALML6Q8TD86 181 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SCYL1Q96KG9 808 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SIK2Q9H0K1 926 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 SPATS2LQ9NUQ6 558 aaKnown RBP25.32■■□□□ 1.64
ROM1-201ENST00000278833 DLGAP2Q9P1A6 1054 aa25.32■■□□□ 1.64
ROM1-201ENST00000278833 FRMPD3Q5JV73 1810 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 E9PAM4 449 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 GOLGA8TH3BQL2 631 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 PDE5AO76074 875 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 NDST2P52849 883 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 NAGLUP54802 743 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 CEP97Q8IW35 865 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 DENND6AQ8IWF6 608 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 UMODL1-AS1Q8N2C9 162 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 KDM1BQ8NB78 822 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 CCDC126Q96EE4 140 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 TMEM209Q96SK2 561 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 LBHD1Q9BQE6 289 aaPredicted RBP25.31■■□□□ 1.64
ROM1-201ENST00000278833 VPS45Q9NRW7 570 aa25.31■■□□□ 1.64
ROM1-201ENST00000278833 RBM22Q9NW64 420 aaKnown RBP eCLIP25.31■■□□□ 1.64
ROM1-201ENST00000278833 ZDHHC2Q9UIJ5 367 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms