RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ATXN7L3BQ96GX2 97 aa8□□□□□ -1.13
CLK1-215ENST00000621181 PPP1R16AQ96I34 528 aa8□□□□□ -1.13
CLK1-215ENST00000621181 SLC46A1Q96NT5 459 aa8□□□□□ -1.13
CLK1-215ENST00000621181 C2orf49Q9BVC5 232 aaPredicted RBP8□□□□□ -1.13
CLK1-215ENST00000621181 SLC4A5Q9BY07 1137 aa8□□□□□ -1.13
CLK1-215ENST00000621181 SAMSN1Q9NSI8 373 aaKnown RBP8□□□□□ -1.13
CLK1-215ENST00000621181 NCKIPSDQ9NZQ3 722 aa8□□□□□ -1.13
CLK1-215ENST00000621181 HS3ST2Q9Y278 367 aa8□□□□□ -1.13
CLK1-215ENST00000621181 KIF26BQ2KJY2 2108 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 LY6G6EA0A0G2JKS1 128 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 CPED1A4D0V7 1026 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 K7ENP7 123 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 K7ERQ8 282 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 P4HA2O15460 535 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 THAP12O43422 761 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 GRAP2O75791 330 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 MT-CO1P00395 513 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 SRCP12931 536 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 RRM1P23921 792 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 IRAK1P51617 712 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 MTA1Q13330 715 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 PDCLQ13371 301 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 EIF4EBP2Q13542 120 aaPredicted RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 KIAA1614Q5VZ46 1190 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 SPECC1LQ69YQ0 1117 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 GUSBP11Q6P575 273 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 INO80CQ6PI98 192 aaPredicted RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 CCDC81Q6ZN84 652 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ERN2Q76MJ5 926 aaKnown RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 ABI3BPQ7Z7G0 1075 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 TMEM110Q86TL2 294 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 PARGQ86W56 976 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ARHGEF19Q8IW93 802 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ARL14Q8N4G2 192 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 TMIEQ8NEW7 156 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 OR2A12Q8NGT7 310 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 LMO3Q8TAP4 145 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 GRAMD1AQ96CP6 724 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 SIK2Q9H0K1 926 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.99□□□□□ -1.13
CLK1-215ENST00000621181 DACH1Q9UI36 760 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ZFR2Q9UPR6 939 aaKnown RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 PPP2R2CQ9Y2T4 447 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 PCDHGA10Q9Y5H3 936 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 OR51B4Q9Y5P0 310 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 U3KQA8 63 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 V9GYY5 206 aaPredicted RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 AHCTF1Q8WYP5 2266 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 POM121BA6NF01 834 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 NRDCO43847 1150 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 SNAP91O60641 907 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 HSF2BPO75031 334 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 LEFTY1O75610 366 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ENDOD1O94919 500 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 PAK4O96013 591 aaPredicted RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 CSF2P04141 144 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 RHOCP08134 193 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 KRT10P13645 584 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 NME1P15531 152 aaKnown RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 GNA15P30679 374 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 CDH4P55283 916 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 RPS21P63220 83 aaKnown RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 FZD2Q14332 565 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 MEA1Q16626 185 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ERCC6LQ2NKX8 1250 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 DEFB133Q30KQ1 61 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 TMEM259Q4ZIN3 620 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 EFHC1Q5JVL4 640 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 IGF2-ASQ6U949 168 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 CRTC1Q6UUV9 634 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 LINGO4Q6UY18 593 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 RBM44Q6ZP01 1051 aaKnown RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 DEFB106AQ8N104 65 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 TPCN2Q8NHX9 752 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ZNF606Q8WXB4 792 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 ARRDC3Q96B67 414 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 CEP63Q96MT8 703 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 KREMEN1Q96MU8 473 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 PANX2Q96RD6 677 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 IL12RB2Q99665 862 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 BAG1Q99933 345 aaPredicted RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 SLC17A9Q9BYT1 436 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 TNKS2Q9H2K2 1166 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 IL36AQ9UHA7 158 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 IPO11Q9UI26 975 aaKnown RBP7.99□□□□□ -1.13
CLK1-215ENST00000621181 VPS51Q9UID3 782 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 TBC1D30Q9Y2I9 924 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 PCDHGA8Q9Y5G5 932 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 HS3ST4Q9Y661 456 aa7.99□□□□□ -1.13
CLK1-215ENST00000621181 SPTY2D1-AS1A0A0U1RR47 76 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 LRRC10BA6NIK2 292 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 MUSKO15146 869 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 TEX33O43247 280 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 ZSCAN12O43309 604 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 AQP9O43315 295 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 LZTS3O60299 673 aaPredicted RBP7.98□□□□□ -1.13
CLK1-215ENST00000621181 PAGE1O75459 146 aa7.98□□□□□ -1.13
CLK1-215ENST00000621181 TCEA3O75764 348 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms