RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 GOLGA8CPA6NN73 597 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 TSPAN6O43657 245 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 THEGLP0DJG4 465 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 RAD51Q06609 339 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 SMAD1Q15797 465 aaKnown RBP19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 MYLK3Q32MK0 819 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 PARP15Q460N3 678 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 ZNF805Q5CZA5 627 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 SFMBT2Q5VUG0 894 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 CAVIN1Q6NZI2 390 aaKnown RBP19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 TMC6Q7Z403 805 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 UMODL1-AS1Q8N2C9 162 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 RYBPQ8N488 228 aaPredicted RBP19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 SLC17A9Q9BYT1 436 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 TM6SF2Q9BZW4 377 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 ZDHHC6Q9H6R6 413 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 ZFR2Q9UPR6 939 aaKnown RBP19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 FADS3Q9Y5Q0 445 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 SPEGQ15772 3267 aa19.39■□□□□ 0.69
CCDC28A-203ENST00000617445 A0A1B0GTH6 734 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 LRRC53A6NM62 1247 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 SRRM3A6NNA2 597 aaPredicted RBP19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 RNF103O00237 685 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 BUB1O43683 1085 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 CAPNS1P04632 268 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 PRLRP16471 622 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 PRKCIP41743 596 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 BNIP3Q12983 259 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 ILKQ13418 452 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 MAMLD1Q13495 774 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 ASIC2Q16515 512 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 PLEKHA7Q6IQ23 1121 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 KANSL1Q7Z3B3 1105 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 ABI3BPQ7Z7G0 1075 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 TMPRSS12Q86WS5 348 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 ZNF354CQ86Y25 554 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 PYROXD2Q8N2H3 581 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 EID2Q8N6I1 236 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 ASB12Q8WXK4 309 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 KLK6Q92876 244 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 GDAP1L1Q96MZ0 367 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 NCAPGQ9BPX3 1015 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 DMXL2Q8TDJ6 3036 aa19.38■□□□□ 0.69
CCDC28A-203ENST00000617445 TDRD6O60522 2096 aaKnown RBP19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 ZZEF1O43149 2961 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 C16orf96A6NNT2 1141 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 KRIT1O00522 736 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 CREB3O43889 395 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 SGCGQ13326 291 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 PARS2Q7L3T8 475 aaKnown RBP19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 FNIP1Q8TF40 1166 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 TSC1Q92574 1164 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 LENG8Q96PV6 779 aaPredicted RBP19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 TTYH3Q9C0H2 523 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 HAUS4Q9H6D7 363 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 CCDC86Q9H6F5 360 aaKnown RBP19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 NOL6Q9H6R4 1146 aaKnown RBP19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 TAS2R14Q9NYV8 317 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 DKK4Q9UBT3 224 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 MFHAS1Q9Y4C4 1052 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 ACTL7AQ9Y615 435 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 APC2O95996 2303 aa19.37■□□□□ 0.69
CCDC28A-203ENST00000617445 CFAP47Q6ZTR5 3102 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 A6NNZ2 444 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 RASA4BC9J798 803 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 RASA4O43374 803 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 RFPL3O75679 317 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 RNF8O76064 485 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 TMCC1O94876 653 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 IGSF6O95976 241 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 PSMA2P25787 234 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 ZNF135P52742 658 aaPredicted RBP19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 TPM4P67936 248 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 SERINC3Q13530 473 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 HS1BP3Q53T59 392 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 FIGNQ5HY92 759 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 SEL1L3Q68CR1 1132 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 PROSER1Q86XN7 944 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 PSTKQ8IV42 348 aaKnown RBP19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 TRIM11Q96F44 468 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 C1QTNF2Q9BXJ5 285 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 CA5BQ9Y2D0 317 aa19.36■□□□□ 0.69
CCDC28A-203ENST00000617445 TMEM191CA6NGB0 347 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 TMCO5BA8MYB1 307 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 NEMP1O14524 444 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 PAK4O96013 591 aaPredicted RBP19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 SERPINC1P01008 464 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 FTLP02792 175 aaPredicted RBP19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 MYBL1P10243 752 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 CKMT2P17540 419 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 SUOXP51687 545 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 NDST2P52849 883 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 TPI1P60174 286 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 OGDHQ02218 1023 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 KLHL30Q0D2K2 578 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 MAPK8IP2Q13387 824 aaPredicted RBP19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 ZNF211Q13398 564 aaPredicted RBP19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 GRM3Q14832 879 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 NR1I3Q14994 352 aa19.35■□□□□ 0.69
CCDC28A-203ENST00000617445 IQCB1Q15051 598 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms