RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 BRINP1O60477 761 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 GIMD1P0DJR0 217 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 CKMT1AP12532 417 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 SKILP12757 684 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 RRM1P23921 792 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 CASP14P31944 242 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 ARTNQ5T4W7 220 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 C22orf39Q6P5X5 142 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 LRRC31Q6UY01 552 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 ZNF783Q6ZMS7 281 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 CHST14Q8NCH0 376 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 OR13H1Q8NG92 308 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 RXFP2Q8WXD0 754 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 TRIM11Q96F44 468 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 CFAP57Q96MR6 1250 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 UCKL1Q9NWZ5 548 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 IL36AQ9UHA7 158 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 ZFR2Q9UPR6 939 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 C2CD4BA6NLJ0 364 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 TMCO5BA8MYB1 307 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 RNF103O00237 685 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 ATXN7O15265 892 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 PIAS2O75928 621 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 ENDOD1O94919 500 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 MT-CO3P00414 261 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 GYPCP04921 128 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 ACTN2P35609 894 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 PTPN9P43378 593 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 DAB2P98082 770 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 TBC1D25Q3MII6 688 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 ARL13BQ3SXY8 428 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 TMEM259Q4ZIN3 620 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 E4F1Q66K89 784 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 DCUN1D2Q6PH85 259 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 SARM1Q6SZW1 724 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 GCNT7Q6ZNI0 430 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 DCP2Q8IU60 420 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 VSTM4Q8IW00 320 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 DRC7Q8IY82 874 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 EMC1Q8N766 993 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 LSM14AQ8ND56 463 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 KLK6Q92876 244 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 PPP1R16AQ96I34 528 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 MYOCQ99972 504 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 TRIM5Q9C035 493 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 CEP44Q9C0F1 390 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 FZD3Q9NPG1 666 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 GPR27Q9NS67 375 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 PARVAQ9NVD7 372 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 ZNHIT6Q9NWK9 470 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 RAI2Q9Y5P3 530 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 SNX10Q9Y5X0 201 aa17.88■□□□□ 0.45
SHKBP1-203ENST00000594298 ILVBLA1L0T0 632 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 DDX3XO00571 662 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 ZNF821O75541 412 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 FTLP02792 175 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 GP1BAP07359 652 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 MYBL1P10243 752 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 GPD1P21695 349 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 OR1E1P30953 314 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 RFC1P35251 1148 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 RECQLP46063 649 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 ATP11AP98196 1134 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 SLC20A2Q08357 652 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 ARSIQ5FYB1 569 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 CDCP2Q5VXM1 449 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 RETSATQ6NUM9 610 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 WDR59Q6PJI9 974 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 LINGO4Q6UY18 593 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 DPY19L3Q6ZPD9 716 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 STRADAQ7RTN6 431 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 BNIPLQ7Z465 357 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 TFAP2DQ7Z6R9 452 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 SLC22A18ASQ8N1D0 253 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 FAM181AQ8N9Y4 354 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 HAPLN3Q96S86 360 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 CALN1Q9BXU9 219 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 NLGN3Q9NZ94 848 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 MPP6Q9NZW5 540 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 ZNF212Q9UDV6 495 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 HS3ST3A1Q9Y663 406 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 WASF2Q9Y6W5 498 aa17.87■□□□□ 0.45
SHKBP1-203ENST00000594298 KNTC1P50748 2209 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 CXorf51AA0A1B0GTR3 108 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 NEMP2A6NFY4 417 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 A6NNZ2 444 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 LEFTY1O75610 366 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 ZMPSTE24O75844 475 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 PCDH8O95206 1070 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 ALPPL2P10696 532 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 SERPINH1P50454 418 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 NEK3P51956 506 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 CLDN2P57739 230 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 CCDC14Q49A88 953 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 HGSNATQ68CP4 663 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 SEL1L3Q68CR1 1132 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 KIAA1161Q6NSJ0 714 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 KDM7AQ6ZMT4 941 aa17.86■□□□□ 0.45
SHKBP1-203ENST00000594298 Q6ZSR6 202 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms