RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SYN2Q92777 582 aaPredicted RBP21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 CDC6Q99741 560 aa21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 SNRNP25Q9BV90 132 aaKnown RBP21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 CAPN11Q9UMQ6 739 aa21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 ZFR2Q9UPR6 939 aaKnown RBP21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 SCINQ9Y6U3 715 aa21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 TMEM131Q92545 1883 aa21.81■■□□□ 1.08
PPP4R1-228ENST00000584074 C1QTNF9BB2RNN3 333 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 RNF8O76064 485 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 ATXN1LP0C7T5 689 aaKnown RBP21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 C1QTNF9P0C862 333 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 MYBL1P10243 752 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 MIPP30301 263 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 HTR7P34969 479 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 SNRPD1P62314 119 aaKnown RBP21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 ZBED6P86452 979 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 MYLK3Q32MK0 819 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 CYP4V2Q6ZWL3 525 aaPredicted RBP21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 IQCHQ86VS3 1027 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 TMEM145Q8NBT3 493 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 TRIM11Q96F44 468 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 KCTD15Q96SI1 283 aaPredicted RBP21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 FZD3Q9NPG1 666 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 APOBEC2Q9Y235 224 aaKnown RBP21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 NEUROG3Q9Y4Z2 214 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 FADS3Q9Y5Q0 445 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 BZW2Q9Y6E2 419 aaKnown RBP21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 KNL1Q8NG31 2342 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 WDFY3Q8IZQ1 3526 aa21.8■■□□□ 1.08
PPP4R1-228ENST00000584074 EEF2KO00418 725 aaKnown RBP21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 PRPSAP2O60256 369 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 LRCH4O75427 683 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 POP4O95707 220 aaKnown RBP21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 SERPING1P05155 500 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 ST3GAL2Q16842 350 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 TMEM259Q4ZIN3 620 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 INO80DQ53TQ3 878 aaPredicted RBP21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 SAP25Q8TEE9 199 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 ADAMTS14Q8WXS8 1223 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 CELF6Q96J87 481 aaKnown RBP21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 LRIG1Q96JA1 1093 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 LRRC19Q9H756 370 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 ERVMER34-1Q9H9K5 563 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 MRPL47Q9HD33 250 aaKnown RBP21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 TOR4AQ9NXH8 423 aa21.79■■□□□ 1.08
PPP4R1-228ENST00000584074 CHD5Q8TDI0 1954 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 GOLGA8CPA6NN73 597 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 C16orf96A6NNT2 1141 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 GYPCP04921 128 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 UGT2B4P06133 528 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 ITGAVP06756 1048 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 ARRB1P49407 418 aaPredicted RBP21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 OVGP1Q12889 678 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 SKOR2Q2VWA4 1001 aaPredicted RBP21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 ZNF805Q5CZA5 627 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 UNQ6494/PRO21346Q6UXR6 183 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 CASKIN2Q8WXE0 1202 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 GDAP1L1Q96MZ0 367 aa21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 TMEM121BQ9BXQ6 578 aaPredicted RBP21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 LUC7L2Q9Y383 392 aaKnown RBP21.78■■□□□ 1.08
PPP4R1-228ENST00000584074 EIF3CLB5ME19 914 aaKnown RBP21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 J3KR12 359 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 DAPK3O43293 454 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 AP1G1O43747 822 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 MAGEC1O60732 1142 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 HNRNPA2B1P22626 353 aaKnown RBP21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 EPHA8P29322 1005 aaPredicted RBP21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 AKT2P31751 481 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 ABL2P42684 1182 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 NDST2P52849 883 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 CLDN2P57739 230 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 RHOAP61586 193 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 BNIP3Q12983 259 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 MAPK8IP2Q13387 824 aaPredicted RBP21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 CYTH1Q15438 398 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 INAVAQ3KP66 663 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 PPP6R3Q5H9R7 873 aaPredicted RBP21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 RFX8Q6ZV50 586 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 VPS36Q86VN1 386 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 GATA6Q92908 595 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 IQCDQ96DY2 449 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 KLHDC7BQ96G42 594 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 FEM1CQ96JP0 617 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 KLHL32Q96NJ5 620 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 EIF3CQ99613 913 aaKnown RBP21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 OSBPL1AQ9BXW6 950 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 XPO4Q9C0E2 1151 aaKnown RBP21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 SLC39A8Q9C0K1 460 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 DONSONQ9NYP3 566 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 MSRB2Q9Y3D2 182 aa21.77■■□□□ 1.08
PPP4R1-228ENST00000584074 KMT2BQ9UMN6 2715 aaPredicted RBP21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 A0A087X0T9 212 aa21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 IGSF6O95976 241 aa21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 PROS1P07225 676 aa21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 FAM228BP0C875 321 aa21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 THEGLP0DJG4 465 aa21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 TCF4P15884 667 aa21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 RXRGP48443 463 aa21.76■■□□□ 1.07
PPP4R1-228ENST00000584074 RPS21P63220 83 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms