RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 SHROOM3Q8TF72 1996 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 LRRC14BA6NHZ5 514 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 HDAC3O15379 428 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 ITGB6P18564 788 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 STX1BP61266 288 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 TIGD5Q53EQ6 642 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 MTX3Q5HYI7 312 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 FBXW8Q8N3Y1 598 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 LRRC52Q8N7C0 313 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 C3orf58Q8NDZ4 430 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 CIB1Q99828 191 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 NCKIPSDQ9NZQ3 722 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 FKBP6O75344 327 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 SIX3O95343 332 aaPredicted RBP13.82□□□□□ -0.2
NDEL1-204ENST00000578172 UGT1A6P19224 532 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 GRK4P32298 578 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 CD68P34810 354 aaPredicted RBP13.82□□□□□ -0.2
NDEL1-204ENST00000578172 DAOAP59103 153 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 ENPEPQ07075 957 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 GALNT3Q14435 633 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 TBL1YQ9BQ87 522 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 NT5C1B-RDH14C9J2C7 533 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
NDEL1-204ENST00000578172 PAGE1O75459 146 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 SCNN1BP51168 640 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 KYAT1Q16773 422 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 KCTD21Q4G0X4 260 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 NOL9Q5SY16 702 aaKnown RBP13.82□□□□□ -0.2
NDEL1-204ENST00000578172 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 ZDHHC17Q8IUH5 632 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
NDEL1-204ENST00000578172 HEXDCQ8WVB3 486 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 DCUN1D5Q9BTE7 237 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
NDEL1-204ENST00000578172 KNL1Q8NG31 2342 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 C15orf38-AP3S2A0A0A6YYH1 394 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 RRN3P2A6NIE6 340 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 AHCYL1O43865 530 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 IRF1P10914 325 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 CKMT2P17540 419 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 CNTFP26441 200 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 SLC39A12Q504Y0 691 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 NEPROQ6NW34 567 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 ARPINQ7Z6K5 226 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 MFN1Q8IWA4 741 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 BRI3BPQ8WY22 251 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 EZH1Q92800 747 aaPredicted RBP13.81□□□□□ -0.2
NDEL1-204ENST00000578172 RPRD1AQ96P16 312 aaPredicted RBP13.81□□□□□ -0.2
NDEL1-204ENST00000578172 NAT9Q9BTE0 207 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 FBXO5Q9UKT4 447 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 ACTL7AQ9Y615 435 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 PHIPQ8WWQ0 1821 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 DLX3O60479 287 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 SNNO75324 88 aaPredicted RBP13.81□□□□□ -0.2
NDEL1-204ENST00000578172 TIPRLO75663 272 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 CLPTM1O96005 669 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 PRSS56P0CW18 603 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 TSHRP16473 764 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 SLC1A2P43004 574 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 DSC2Q02487 901 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 SGO1Q5FBB7 561 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 GPR158Q5T848 1215 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 NAT16Q8N8M0 369 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 HDAC10Q969S8 669 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 TUBGCP3Q96CW5 907 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 DCUN1D1Q96GG9 259 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 CHCHD3Q9NX63 227 aaKnown RBP13.81□□□□□ -0.2
NDEL1-204ENST00000578172 IPO11Q9UI26 975 aaKnown RBP13.81□□□□□ -0.2
NDEL1-204ENST00000578172 DPYSL4O14531 572 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 DAB1O75553 588 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 CCDC153Q494R4 210 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 KLC3Q6P597 504 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 RBM44Q6ZP01 1051 aaKnown RBP13.81□□□□□ -0.2
NDEL1-204ENST00000578172 CNTD1Q8N815 330 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 IFT43Q96FT9 208 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 SEPHS2Q99611 448 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 SLC39A8Q9C0K1 460 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 CCDC68Q9H2F9 335 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 EFCAB1Q9HAE3 211 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 PNPLA8Q9NP80 782 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 TIMM22Q9Y584 194 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 AP4B1Q9Y6B7 739 aa13.81□□□□□ -0.2
NDEL1-204ENST00000578172 A6NHS1 94 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 EEF1B2P24534 225 aaKnown RBP13.8□□□□□ -0.2
NDEL1-204ENST00000578172 PNPLA4P41247 253 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 CD151P48509 253 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 PGFP49763 221 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 ECT2LQ008S8 904 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 TSPY1Q01534 308 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 FASTKQ14296 549 aaKnown RBP13.8□□□□□ -0.2
NDEL1-204ENST00000578172 PSMD5Q16401 504 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 PFKFB4Q16877 469 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 ZNF513Q8N8E2 541 aaPredicted RBP13.8□□□□□ -0.2
NDEL1-204ENST00000578172 CYGBQ8WWM9 190 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 SMIM14Q96QK8 99 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 FAM96AQ9H5X1 160 aa13.8□□□□□ -0.2
NDEL1-204ENST00000578172 SEMA4BQ9NPR2 832 aaPredicted RBP13.8□□□□□ -0.2
NDEL1-204ENST00000578172 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms