RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 ITFG1Q8TB96 612 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 PTCD2Q8WV60 388 aaKnown RBP19.55■□□□□ 0.72
PKD1-230ENST00000565639 ING5Q8WYH8 240 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 C2orf49Q9BVC5 232 aaPredicted RBP19.55■□□□□ 0.72
PKD1-230ENST00000565639 KIFC1Q9BW19 673 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 SENP1Q9P0U3 644 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 ZNF180Q9UJW8 692 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 CXorf51AA0A1B0GTR3 108 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 ATP9BO43861 1147 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 PENKP01210 267 aaPredicted RBP19.55■□□□□ 0.72
PKD1-230ENST00000565639 INHBAP08476 426 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 SLC12A1Q13621 1099 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 CYTH1Q15438 398 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 PCID2Q5JVF3 399 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 TRMT10BQ6PF06 316 aaKnown RBP19.55■□□□□ 0.72
PKD1-230ENST00000565639 TMEM184AQ6ZMB5 413 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 SLC26A11Q86WA9 606 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 BHMTQ93088 406 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 ACDQ96AP0 544 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 TIFAQ96CG3 184 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 PSD3Q9NYI0 1048 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 ACTL7AQ9Y615 435 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 FAM169AQ9Y6X4 670 aa19.55■□□□□ 0.72
PKD1-230ENST00000565639 PDE4DIPQ5VU43 2346 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 SLC9A3R1O14745 358 aaPredicted RBP19.54■□□□□ 0.72
PKD1-230ENST00000565639 SNAP91O60641 907 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 CD160O95971 181 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 EPOP01588 193 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 SERPINF2P08697 491 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 TPH1P17752 444 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 CR2P20023 1033 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 NUMBP49757 651 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 ATP1A2P50993 1020 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 PLK1P53350 603 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 NAB1Q13506 487 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 IHHQ14623 411 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 PCSK7Q16549 785 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 TRABD2AQ86V40 505 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 CTAGE3PQ8IX95 158 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 CELF5Q8N6W0 485 aaKnown RBP19.54■□□□□ 0.72
PKD1-230ENST00000565639 ZNF557Q8N988 423 aaPredicted RBP19.54■□□□□ 0.72
PKD1-230ENST00000565639 CDKL2Q92772 493 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 MRRFQ96E11 262 aaKnown RBP19.54■□□□□ 0.72
PKD1-230ENST00000565639 PLK2Q9NYY3 685 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 VPS51Q9UID3 782 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 RANBP2P49792 3224 aaKnown RBP19.54■□□□□ 0.72
PKD1-230ENST00000565639 TRANK1O15050 2925 aa19.54■□□□□ 0.72
PKD1-230ENST00000565639 LOC285095A0A1B0GVY8 99 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 CBX2Q14781 532 aaPredicted RBP19.53■□□□□ 0.72
PKD1-230ENST00000565639 ANKRD20A4Q4UJ75 823 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 RETSATQ6NUM9 610 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 CNPY4Q8N129 248 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 PPM1NQ8N819 430 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
PKD1-230ENST00000565639 IRF7Q92985 503 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 FEM1CQ96JP0 617 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 MRM3Q9HC36 420 aaKnown RBP19.53■□□□□ 0.72
PKD1-230ENST00000565639 SMYD2Q9NRG4 433 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 NUP210Q8TEM1 1887 aaPredicted RBP19.53■□□□□ 0.72
PKD1-230ENST00000565639 IQANK1A0A1B0GTG1 560 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 ZCWPW2A0A1B0GU75 182 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 CXorf49A8MYA2 514 aaPredicted RBP19.53■□□□□ 0.72
PKD1-230ENST00000565639 PIAS1O75925 651 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 KRT15P19012 456 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 NSUN2Q08J23 767 aaKnown RBP eCLIP19.53■□□□□ 0.72
PKD1-230ENST00000565639 LMAN2Q12907 356 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 SLC1A5Q15758 541 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 TMEM25Q86YD3 366 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 ZNF669Q96BR6 464 aaPredicted RBP19.53■□□□□ 0.72
PKD1-230ENST00000565639 NSUN3Q9H649 340 aaKnown RBP19.53■□□□□ 0.72
PKD1-230ENST00000565639 SPHK2Q9NRA0 654 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 CLEC4EQ9ULY5 219 aa19.53■□□□□ 0.72
PKD1-230ENST00000565639 RFXAPO00287 272 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 INSIG1O15503 277 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 TMCC1O94876 653 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 CDK18Q07002 472 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 MGAT5Q09328 741 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 TERF2Q15554 542 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 PLEKHG6Q3KR16 790 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 PKN3Q6P5Z2 889 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 MARK2Q7KZI7 788 aaKnown RBP19.52■□□□□ 0.72
PKD1-230ENST00000565639 GPR149Q86SP6 731 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 METTL3Q86U44 580 aaKnown RBP19.52■□□□□ 0.72
PKD1-230ENST00000565639 PPHLN1Q8NEY8 458 aaKnown RBP19.52■□□□□ 0.72
PKD1-230ENST00000565639 CERS2Q96G23 380 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 LMLNQ96KR4 655 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 FCRL3Q96P31 734 aaPredicted RBP19.52■□□□□ 0.72
PKD1-230ENST00000565639 NUDCD1Q96RS6 583 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 CAPS2Q9BXY5 557 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 CHRAC1Q9NRG0 131 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 MARK1Q9P0L2 795 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 MIA3Q5JRA6 1907 aa19.52■□□□□ 0.72
PKD1-230ENST00000565639 TTC24A2A3L6 582 aaPredicted RBP19.52■□□□□ 0.71
PKD1-230ENST00000565639 HLA-DPA1P20036 260 aa19.52■□□□□ 0.71
PKD1-230ENST00000565639 ADRA1DP25100 572 aa19.52■□□□□ 0.71
PKD1-230ENST00000565639 CHRNA4P43681 627 aa19.52■□□□□ 0.71
PKD1-230ENST00000565639 SERPINH1P50454 418 aaKnown RBP19.52■□□□□ 0.71
PKD1-230ENST00000565639 RALGPS1Q5JS13 557 aa19.52■□□□□ 0.71
PKD1-230ENST00000565639 RARS2Q5T160 578 aaKnown RBP19.52■□□□□ 0.71
PKD1-230ENST00000565639 LGSNQ5TDP6 509 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms