RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ADPRHP54922 357 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 SHBQ15464 509 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 ZNF423Q2M1K9 1284 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 ACCSLQ4AC99 568 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 C6orf118Q5T5N4 469 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 FAM72AQ5TYM5 149 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 FAM72DQ6L9T8 149 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 IL27RAQ6UWB1 636 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 Q6ZVU0 165 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 FAM72BQ86X60 149 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 GATAD2AQ86YP4 633 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 MAP7D3Q8IWC1 876 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 RHOT1Q8IXI2 618 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 SYCE1Q8N0S2 351 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 FAM71BQ8TC56 605 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 TMEM248Q9NWD8 314 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 SALL4Q9UJQ4 1053 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 TFR2Q9UP52 801 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 DUSP10Q9Y6W6 482 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 CHD5Q8TDI0 1954 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 TMEM110-MUSTN1A8MSY1 372 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 EEF2KO00418 725 aaKnown RBP15.97■□□□□ 0.15
USB1-208ENST00000563207 SPOPO43791 374 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 CREB3O43889 395 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 BNIP3LO60238 219 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 TRIM16O95361 564 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 GOT1P17174 413 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 COMTP21964 271 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 GLDCP23378 1020 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 EPHB2P29323 1055 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 OR1E1P30953 314 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 MAT2AP31153 395 aaKnown RBP15.97■□□□□ 0.15
USB1-208ENST00000563207 ETFBP38117 255 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 ARL4AP40617 200 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 TPI1P60174 286 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 SULT2A1Q06520 285 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 HNRNPDQ14103 355 aaKnown RBP15.97■□□□□ 0.15
USB1-208ENST00000563207 PDK2Q15119 407 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 TEAD4Q15561 434 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 DLG2Q15700 870 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 RWDD4Q6NW29 188 aaKnown RBP15.97■□□□□ 0.15
USB1-208ENST00000563207 ADAT2Q7Z6V5 191 aaKnown RBP15.97■□□□□ 0.15
USB1-208ENST00000563207 GLRX5Q86SX6 157 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 DAAM2Q86T65 1068 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 NLRP14Q86W24 1093 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 VSIG1Q86XK7 387 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 PYROXD2Q8N2H3 581 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 OR2T34Q8NGX1 318 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 KIAA1524Q8TCG1 905 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 HSPH1Q92598 858 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 MAGEB5Q9BZ81 275 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.97■□□□□ 0.15
USB1-208ENST00000563207 DDX56Q9NY93 547 aaKnown RBP15.97■□□□□ 0.15
USB1-208ENST00000563207 MPP6Q9NZW5 540 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 FZD4Q9ULV1 537 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 SCML1Q9UN30 329 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 CA5BQ9Y2D0 317 aa15.97■□□□□ 0.15
USB1-208ENST00000563207 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
USB1-208ENST00000563207 DSPP15924 2871 aaKnown RBP15.97■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3DA0A087WVF3 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3IA0A087WXS9 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3EA0A087X179 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3KA0A087X1G2 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 A0A0D9SEW6 157 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 A0A1W2PR77 199 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 ILVBLA1L0T0 632 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3FA6NER0 549 aaPredicted RBP15.96■□□□□ 0.15
USB1-208ENST00000563207 ZNF487B1APH4 448 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3LB9A6J9 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 H3BRJ5 948 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 VILLO15195 856 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 DAPK3O43293 454 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 PSTPIP1O43586 416 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 BUB1O43683 1085 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 ATP9BO43861 1147 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3HP0C7X1 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TCF4P15884 667 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 C5AR1P21730 350 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 CLDN6P56747 220 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TAS2R40P59535 323 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 RACK1P63244 317 aaKnown RBP15.96■□□□□ 0.15
USB1-208ENST00000563207 CNTN1Q12860 1018 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 KRT81Q14533 505 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 CA9Q16790 459 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 SMTNL2Q2TAL5 461 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 CCDC157Q569K6 752 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 PPP6R3Q5H9R7 873 aaPredicted RBP15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3GQ6DHY5 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3CQ6IPX1 549 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 LINGO4Q6UY18 593 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TFAP2DQ7Z6R9 452 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 TBC1D3Q8IZP1 549 aaPredicted RBP15.96■□□□□ 0.15
USB1-208ENST00000563207 RTL3Q8N8U3 475 aaKnown RBP15.96■□□□□ 0.15
USB1-208ENST00000563207 KCTD6Q8NC69 237 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 KCTD15Q96SI1 283 aaPredicted RBP15.96■□□□□ 0.15
USB1-208ENST00000563207 AASDHPPTQ9NRN7 309 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 ZNF212Q9UDV6 495 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 VPS28Q9UK41 221 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 NEU3Q9UQ49 428 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms