RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	EIF4E1B	A6NMX2	242 aa	Known RBP	18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	KRIT1	O00522	736 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	CYP1A1	P04798	512 aa	Predicted RBP	18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	ALPPL2	P10696	532 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	CKMT1A	P12532	417 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	SOX5	P35711	763 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	E2F1	Q01094	437 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	KRT31	Q15323	416 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	TPRG1L	Q5T0D9	272 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	ZNF677	Q86XU0	584 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	NETO2	Q8NC67	525 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	ZNF548	Q8NEK5	533 aa	Predicted RBP	18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	FAM172A	Q8WUF8	416 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	ARHGEF2	Q92974	986 aa	Known RBP	18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	GPR27	Q9NS67	375 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	NLGN3	Q9NZ94	848 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	RAI2	Q9Y5P3	530 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375		U3KQA8	63 aa		18.35	■□□□□ 0.53
DCAF11-238	ENST00000561375	C2CD4B	A6NLJ0	364 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	C16orf96	A6NNT2	1141 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375		K7ESM1	405 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	NEMP1	O14524	444 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	RRP8	O43159	456 aa	Known RBP	18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	AP1G1	O43747	822 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	OPA1	O60313	960 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	LRIG2	O94898	1065 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	UGT2B4	P06133	528 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	RHOQ	P17081	205 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	ETFB	P38117	255 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	MAPKAPK2	P49137	400 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	HDAC4	P56524	1084 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	JAM2	P57087	298 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	HNRNPK	P61978	463 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	CCDC173	Q0VFZ6	552 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	SGCG	Q13326	291 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	PDE1C	Q14123	709 aa	Predicted RBP	18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	ZNF354C	Q86Y25	554 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	SNIP1	Q8TAD8	396 aa	Known RBP	18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	BAP1	Q92560	729 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	TBC1D31	Q96DN5	1066 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	OSBPL2	Q9H1P3	480 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	TMEM248	Q9NWD8	314 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	IPO11	Q9UI26	975 aa	Known RBP	18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	KLF15	Q9UIH9	416 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	HS3ST3A1	Q9Y663	406 aa		18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	COL27A1	Q8IZC6	1860 aa	Predicted RBP	18.34	■□□□□ 0.53
DCAF11-238	ENST00000561375	LRRK1	Q38SD2	2015 aa		18.33	■□□□□ 0.53
DCAF11-238	ENST00000561375	ASXL3	Q9C0F0	2248 aa		18.33	■□□□□ 0.53
DCAF11-238	ENST00000561375	SPTY2D1-AS1	A0A0U1RR47	76 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	FPGT	O14772	594 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	SCAMP1	O15126	338 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	SPINT1	O43278	529 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	RAMP2	O60895	175 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	PLEK	P08567	350 aa	Predicted RBP	18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	PTPN9	P43378	593 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	NRG1	Q02297	640 aa	Predicted RBP	18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	POLD3	Q15054	466 aa	Predicted RBP	18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	ZNF805	Q5CZA5	627 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	CDKAL1	Q5VV42	579 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	PARG	Q86W56	976 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	PYROXD2	Q8N2H3	581 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	OR2AP1	Q8NGE2	309 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	ISG20	Q96AZ6	181 aa	Known RBP	18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	IFT43	Q96FT9	208 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	KLHL32	Q96NJ5	620 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	PCDHB18P	Q96TA0	734 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	KLF6	Q99612	283 aa	Predicted RBP	18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	HPCAL4	Q9UM19	191 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	PTPRQ	Q9UMZ3	2332 aa		18.33	■□□□□ 0.52
DCAF11-238	ENST00000561375	NEMP2	A6NFY4	417 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375		H3BM21	787 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	GSR	P00390	522 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	CSF2	P04141	144 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	PRB1	P04280	392 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	MPO	P05164	745 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	NME1	P15531	152 aa	Known RBP	18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	RFC1	P35251	1148 aa	Predicted RBP	18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	ACTN2	P35609	894 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	RABIF	P47224	123 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	GEMIN4	P57678	1058 aa	Known RBP	18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	PTP4A2	Q12974	167 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	TBC1D25	Q3MII6	688 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	FKBP15	Q5T1M5	1219 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	CDCP2	Q5VXM1	449 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	STRADA	Q7RTN6	431 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	DCP2	Q8IU60	420 aa	Known RBP	18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	RBFA	Q8N0V3	343 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	CACTIN-AS1	Q8N1I8	211 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	FAM174A	Q8TBP5	190 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	FGF11	Q92914	225 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	VOPP1	Q96AW1	172 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	NAF1	Q96HR8	494 aa	Known RBP	18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	FCRL3	Q96P31	734 aa	Predicted RBP	18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	C1QTNF2	Q9BXJ5	285 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	MAGEH1	Q9H213	219 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	ADAM22	Q9P0K1	906 aa		18.32	■□□□□ 0.52
DCAF11-238	ENST00000561375	TSPAN6	O43657	245 aa		18.31	■□□□□ 0.52
DCAF11-238	ENST00000561375	BUB1	O43683	1085 aa		18.31	■□□□□ 0.52
DCAF11-238	ENST00000561375	CS	O75390	466 aa	Known RBP	18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms