RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 IGFN1Q86VF2 1251 aa5.48□□□□□ -1.53
SYNE2-210ENST00000553455 WDR6Q9NNW5 1121 aaKnown RBP5.48□□□□□ -1.53
SYNE2-210ENST00000553455 DIAPH3Q9NSV4 1193 aa5.48□□□□□ -1.53
SYNE2-210ENST00000553455 NCKIPSDQ9NZQ3 722 aa5.48□□□□□ -1.53
SYNE2-210ENST00000553455 CDH22Q9UJ99 828 aa5.48□□□□□ -1.53
SYNE2-210ENST00000553455 GPR34Q9UPC5 381 aa5.48□□□□□ -1.53
SYNE2-210ENST00000553455 LAS1LQ9Y4W2 734 aaKnown RBP5.48□□□□□ -1.53
SYNE2-210ENST00000553455 PCDHGB5Q9Y5G0 923 aa5.48□□□□□ -1.53
SYNE2-210ENST00000553455 KAT6BQ8WYB5 2073 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 DYTNA2CJ06 578 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 K7ENM7 598 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 RNMTO43148 476 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SEC31AO94979 1220 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 CCNDBP1O95273 360 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 POU1F1P28069 291 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 EPHB2P29323 1055 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SLC16A2P36021 539 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 ARL3P36405 182 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 CENPAP49450 140 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 NAP1L1P55209 391 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 MAMLD1Q13495 774 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 PDE1CQ14123 709 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 RNPS1Q15287 305 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 TAF11Q15544 211 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SMTNL2Q2TAL5 461 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SUPT20HL1Q3ZLR7 823 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 KIAA1614Q5VZ46 1190 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 ZNF793Q6ZN11 406 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 DEF8Q6ZN54 512 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 BRINP3Q76B58 766 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 GPAT4Q86UL3 456 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 CADM3Q8N126 398 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SLC25A41Q8N5S1 370 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 USP6NLQ92738 828 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 NELL1Q92832 810 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 ATOH1Q92858 354 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 INTS12Q96CB8 462 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 RSRC1Q96IZ7 334 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SDF4Q9BRK5 362 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SEMA4CQ9C0C4 833 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 PNRC2Q9NPJ4 139 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 THSD1Q9NS62 852 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 RNF146Q9NTX7 359 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 TMEM184CQ9NVA4 438 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 CTNNAL1Q9UBT7 734 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 TBC1D29Q9UFV1 150 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 SLCO3A1Q9UIG8 710 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 INTS6Q9UL03 887 aaKnown RBP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 MKLN1Q9UL63 735 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.47□□□□□ -1.53
SYNE2-210ENST00000553455 KCNE2Q9Y6J6 123 aa5.47□□□□□ -1.53
SYNE2-210ENST00000553455 A0A1W2PQF6 199 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 E5RJQ4 531 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 MASP2O00187 686 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 EBAG9O00559 213 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TLX3O43711 291 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 SLC25A17O43808 307 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 CNOT3O75175 753 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TIPRLO75663 272 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TOP3BO95985 862 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 SLC2A4P14672 509 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 CTPS1P17812 591 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 HOXD9P28356 352 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TTKP33981 857 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 RYKP34925 604 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 HOXD13P35453 343 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 RARSP54136 660 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 CLDN2P57739 230 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 YWHAZP63104 245 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 OLR1P78380 273 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TOMM20Q15388 145 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 PIK3CD-AS1Q5SR53 167 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 ATG9BQ674R7 924 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 SERPINA11Q86U17 422 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 LRRC57Q8N9N7 239 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 KDM1BQ8NB78 822 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 DDB2Q92466 427 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 MSI2Q96DH6 328 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TIGD1Q96MW7 591 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 WDR83Q9BRX9 315 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TUBB6Q9BUF5 446 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 SEPT11Q9NVA2 429 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 LIMA1Q9UHB6 759 aaKnown RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 A4GNTQ9UNA3 340 aa5.46□□□□□ -1.54
SYNE2-210ENST00000553455 TTBK1Q5TCY1 1321 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-210ENST00000553455 RUSC2Q8N2Y8 1516 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 CGB1A6NKQ9 187 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 A6NNC1 897 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 SNAP23O00161 211 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 PRPF4O43172 522 aaKnown RBP eCLIP5.45□□□□□ -1.54
SYNE2-210ENST00000553455 LIASO43766 372 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 PAGE4O60829 102 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 ZNF8P17098 575 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-210ENST00000553455 CLNS1AP54105 237 aaKnown RBP5.45□□□□□ -1.54
SYNE2-210ENST00000553455 ID2Q02363 134 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 ZNF91Q05481 1191 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 MED22Q15528 200 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 GSTA3Q16772 222 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 ALG11Q2TAA5 492 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms