RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 C3orf30Q96M34 536 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 LINC00479Q96M42 142 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 C17orf77Q96MU5 243 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 IFT27Q9BW83 186 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 CDK19Q9BWU1 502 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 TRIM15Q9C019 465 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 NPFFR1Q9GZQ6 430 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 NUP62CLQ9H1M0 184 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 WDR13Q9H1Z4 485 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 CCDC134Q9H6E4 229 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 EPS8L2Q9H6S3 715 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 LRRC4Q9HBW1 653 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 Q9N2J8 555 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 PNPLA8Q9NP80 782 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 FSCN3Q9NQT6 498 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 ZDHHC18Q9NUE0 388 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 TMEM51Q9NW97 253 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 FAM118AQ9NWS6 357 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 OGFRQ9NZT2 677 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 TAAR2Q9P1P5 351 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 SLC25A13Q9UJS0 675 aa0.86□□□□□ -2.27
COPB1-212ENST00000534771 TRPC5Q9UL62 973 aaPredicted RBP0.86□□□□□ -2.27
COPB1-212ENST00000534771 COPG1Q9Y678 874 aaKnown RBP0.86□□□□□ -2.27
COPB1-212ENST00000534771 A0A096LPK6 155 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 CPED1A4D0V7 1026 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 DDTLA6NHG4 134 aaPredicted RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 A6NNZ2 444 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 RHPN2P1A8MT19 583 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 HHLA1C9JL84 531 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ZNF587BE7ETH6 402 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 J3KR12 359 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 NR5A2O00482 541 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 TIMM23O14925 209 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 DHX16O60231 1041 aaKnown RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 NDST3O95803 873 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ZBED1O96006 694 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 IGLV1-44P01699 117 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ANXA6P08133 673 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 LINC00271P0C7V0 271 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 DNAH10OSP0CZ25 163 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 GYS1P13807 737 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 TSHRP16473 764 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 CD53P19397 219 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 FGFR2P21802 821 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 GABRB3P28472 473 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 DPP6P42658 865 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 GPR12P47775 334 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 MCL1Q07820 350 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 GRM4Q14833 912 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 KLHDC7AQ5VTJ3 777 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 FAAP20Q6NZ36 180 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 FAM122CQ6P4D5 195 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 SLC27A1Q6PCB7 646 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 CEACAM20Q6UY09 585 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 SLC9B2Q86UD5 537 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ZNF440Q8IYI8 595 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ENDOVQ8N8Q3 282 aaKnown RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 CLEC4CQ8WTT0 213 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ZNF689Q96CS4 500 aaPredicted RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 FRG2BQ96QU4 278 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 CSF3RQ99062 836 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 NPAS1Q99742 590 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 MSTO1Q9BUK6 570 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 TMEM120AQ9BXJ8 343 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 HDHD5Q9BXW7 423 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 RTFDC1Q9BY42 306 aaPredicted RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 EIF2AQ9BY44 585 aaKnown RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 CADM1Q9BY67 442 aaKnown RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 TRIM31Q9BZY9 425 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 DDX24Q9GZR7 859 aaKnown RBP eCLIP0.85□□□□□ -2.27
COPB1-212ENST00000534771 BTBD1Q9H0C5 482 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 PCDH12Q9NPG4 1184 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ABCF3Q9NUQ8 709 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 FAM120CQ9NX05 1096 aaKnown RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 ZNF224Q9NZL3 707 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 RGL1Q9NZL6 768 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 PRO0461Q9UI25 63 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 HERC5Q9UII4 1024 aaKnown RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 SIX4Q9UIU6 781 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 KCNS2Q9ULS6 477 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 CA14Q9ULX7 337 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 NFU1Q9UMS0 254 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 OSGIN2Q9Y236 505 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 MAN2B2Q9Y2E5 1009 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 DTNAQ9Y4J8 743 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 ZHX2Q9Y6X8 837 aa0.85□□□□□ -2.27
COPB1-212ENST00000534771 FCGBPQ9Y6R7 5405 aaPredicted RBP0.85□□□□□ -2.27
COPB1-212ENST00000534771 A0A0A0MQY5 61 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 A0A0J9YWU9 116 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 A8MU10 97 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 E9PQ18 207 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CAPN9O14815 690 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 MID1O15344 667 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 SRSF10O75494 262 aaKnown RBP0.84□□□□□ -2.27
COPB1-212ENST00000534771 LARGE1O95461 756 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 PATE4P0C8F1 98 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 CDH1P12830 882 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 PAX1P15863 534 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 RXRAP19793 462 aa0.84□□□□□ -2.27
COPB1-212ENST00000534771 PRPH2P23942 346 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms