RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 NIPA2Q8N8Q9 360 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 RHBDD1Q8TEB9 315 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 IGSF8Q969P0 613 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 MYO19Q96H55 970 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 LMLNQ96KR4 655 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 BTN2A3PQ96KV6 586 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 PRICKLE1Q96MT3 831 aaPredicted RBP9.61□□□□□ -0.87
VPS26B-207ENST00000532160 BTBD1Q9H0C5 482 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 DHX35Q9H5Z1 703 aaKnown RBP9.61□□□□□ -0.87
VPS26B-207ENST00000532160 KIAA1522Q9P206 1035 aaPredicted RBP9.61□□□□□ -0.87
VPS26B-207ENST00000532160 STIM2Q9P246 746 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 RNF14Q9UBS8 474 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 SLC12A6Q9UHW9 1150 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 RAB21Q9UL25 225 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 PACSIN2Q9UNF0 486 aaPredicted RBP9.61□□□□□ -0.87
VPS26B-207ENST00000532160 PLA2G4CQ9UP65 541 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 AP4E1Q9UPM8 1137 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 ANKRD6Q9Y2G4 727 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 RAXQ9Y2V3 346 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 ALG6Q9Y672 507 aa9.61□□□□□ -0.87
VPS26B-207ENST00000532160 ARID1BQ8NFD5 2236 aaPredicted RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 TARSL2A2RTX5 802 aaKnown RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 FAM149AA5PLN7 773 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 H0Y8X5 98 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 CREB3O43889 395 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 DNTTP04053 509 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 IGHV4-34P06331 123 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 CD27P26842 260 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 MAN1A1P33908 653 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 PCK1P35558 622 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 GRIA4P48058 902 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 MARCKSL1P49006 195 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 DNA2P51530 1060 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 RPS24P62847 133 aaKnown RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 ACAP1Q15027 740 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 LLGL1Q15334 1064 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 TEAD4Q15561 434 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 ARL13BQ3SXY8 428 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 PPP6R3Q5H9R7 873 aaPredicted RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 EFHC2Q5JST6 749 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 ZFYVE27Q5T4F4 411 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 ERMARDQ5T6L9 678 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 ZNF776Q68DI1 518 aaPredicted RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 FBXL22Q6P050 247 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 TMPRSS7Q7RTY8 843 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 HDXQ7Z353 690 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 LRRC57Q8N9N7 239 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 TRIM58Q8NG06 486 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 NTAN1Q96AB6 310 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 RPRD1AQ96P16 312 aaPredicted RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 WDR24Q96S15 920 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 KCTD15Q96SI1 283 aaPredicted RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 CDC6Q99741 560 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 PRMT1Q99873 361 aaKnown RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 MPP6Q9NZW5 540 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 SERGEFQ9UGK8 458 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 INTS6Q9UL03 887 aaKnown RBP9.6□□□□□ -0.87
VPS26B-207ENST00000532160 DOCK9Q9BZ29 2069 aa9.6□□□□□ -0.87
VPS26B-207ENST00000532160 FAM47DPA6NHR8 397 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 E9PAM4 449 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 F5H5T6 163 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 MID1O15344 667 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 SIN3BO75182 1162 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 CNTN5O94779 1100 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 LRIG2O94898 1065 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 ATP5BP06576 529 aaKnown RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 CD48P09326 243 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 POLR2EP19388 210 aaKnown RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 CSKP41240 450 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 CTSKP43235 329 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 CCT8P50990 548 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 ZBTB16Q05516 673 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 MMRN1Q13201 1228 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 HADHQ16836 314 aaKnown RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 TTC31Q49AM3 519 aaPredicted RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 ALFQ53S48 1182 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 CCDC157Q569K6 752 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 ARTNQ5T4W7 220 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 PAPD7Q5XG87 772 aaKnown RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 C11orf63Q6NUN7 778 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 RWDD4Q6NW29 188 aaKnown RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 PDZD3Q86UT5 571 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 MFN1Q8IWA4 741 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 ZNF683Q8IZ20 524 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 RNF10Q8N5U6 811 aaKnown RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 NETO2Q8NC67 525 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 KRT35Q92764 455 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 AZIN2Q96A70 460 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 SLC6A18Q96N87 628 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 ALS2CR12Q96Q35 445 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 HAPLN3Q96S86 360 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 ZMYND15Q9H091 742 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 RSPH9Q9H1X1 276 aaPredicted RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 PABPC3Q9H361 631 aaKnown RBP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 OCEL1Q9H607 264 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 FBRSQ9HAH7 460 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 EBF2Q9HAK2 575 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 SGK2Q9HBY8 427 aa9.59□□□□□ -0.87
VPS26B-207ENST00000532160 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.59□□□□□ -0.87
VPS26B-207ENST00000532160 OR12D3Q9UGF7 316 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms